Two more Posterior Hox genes and Hox cluster dispersal in echinoderms

Hox and Wnt pattern the primary body axis of an anthozoan cnidarian before gastrulation

(2018) Timothy Q. DuBuc et al.   Nature Communications

Xenacoelomorpha Survey Reveals That All 11 Animal Homeobox Gene Classes Were Present in the First Bilaterians

(2018) Michael Brauchle et al.   Genome Biology and Evolution

The sea cucumber genome provides insights into morphological evolution and visceral regeneration

(2017) Xiaojun Zhang et al.   PLOS BIOLOGY

Evolution of a pentameral body plan was not linked to translocation of anterior Hox genes: the echinoderm HOX cluster revisited

(2016) Maria Byrne et al.   EVOLUTION & DEVELOPMENT

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Xenacoelomorpha is the sister group to Nephrozoa

(2016) Johanna Taylor Cannon et al.   NATURE

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

(2016) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

De Novo Adult Transcriptomes of Two European Brittle Stars: Spotlight on Opsin-Based Photoreception

(2016) Jérôme Delroisse et al.   PLoS One

The origin of the Hox/ParaHox genes, the Ghost Locus hypothesis and the complexity of the first animal

(2015) David E.K. Ferrier   Briefings in Functional Genomics

Hemichordate genomes and deuterostome origins

(2015) Oleg Simakov et al.   NATURE

Phylogenomic Resolution of the Hemichordate and Echinoderm Clade

(2014) Johanna T. Cannon et al.   CURRENT BIOLOGY

Hoxexpression in the direct-type developing sand dollarPeronella japonica

(2014) Jun Tsuchimoto et al.   DEVELOPMENTAL DYNAMICS

Genomic organization of Hox and ParaHox clusters in the echinoderm,Acanthaster planci

(2014) Kenneth W. Baughman et al.   GENESIS

De novo assembly of the transcriptome ofAcanthaster plancitestes

(2014) Michael James Stewart et al.   Molecular Ecology Resources

How Hox genes can shed light on the place of echinoderms among the deuterostomes

(2014) Bruno David et al.   EvoDevo

Quantitative developmental transcriptomes of the sea urchin Strongylocentrotus purpuratus

(2013) Qiang Tu et al.   DEVELOPMENTAL BIOLOGY

A non-tree-based comprehensive study of metazoan Hox and ParaHox genes prompts new insights into their origin and evolution

(2012) Morgane Thomas-Chollier et al.   BMC EVOLUTIONARY BIOLOGY

Identical Genomic Organization of Two Hemichordate Hox Clusters

(2012) Robert Freeman et al.   CURRENT BIOLOGY

Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis

(2012) Q. Tu et al.   GENOME RESEARCH

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Broken colinearity of the amphioxus Hox cluster

(2012) Juan Pascual-Anaya et al.   EvoDevo

HomeoDB2: functional expansion of a comparative homeobox gene database for evolutionary developmental biology

(2011) Ying-fu Zhong et al.   EVOLUTION & DEVELOPMENT

Extensive Chordate and Annelid Macrosynteny Reveals Ancestral Homeobox Gene Organization

(2011) J. H. L. Hui et al.   MOLECULAR BIOLOGY AND EVOLUTION

Acoelomorph flatworms are deuterostomes related to Xenoturbella

(2011) Hervé Philippe et al.   NATURE

Parallelization of the MAFFT multiple sequence alignment program

(2010) Kazutaka Katoh et al.   BIOINFORMATICS

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Coordinated spatial and temporal expression of Hox genes during embryogenesis in the acoel Convolutriloba longifissura

(2009) Andreas Hejnol et al.   BMC BIOLOGY

Ambulacrarian prototypical Hox and ParaHox gene complements of the indirect-developing hemichordate Balanoglossus simodensis

(2009) Tetsuro Ikuta et al.   DEVELOPMENT GENES AND EVOLUTION

Tracking the origins of the bilaterianHoxpatterning system: insights from the acoel flatwormSymsagittifera roscoffensis

(2009) Eduardo Moreno et al.   EVOLUTION & DEVELOPMENT

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Radial Symmetry, the Anterior/Posterior Axis, and Echinoderm Hox Genes

(2008) Rich Mooi et al.   Annual Review of Ecology Evolution and Systematics

The amphioxus genome illuminates vertebrate origins and cephalochordate biology

(2008) L. Z. Holland et al.   GENOME RESEARCH

Noncanonical role of Hox14 revealed by its expression patterns in lamprey and shark

(2008) S. Kuraku et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PCR survey ofXenoturbella bockiHox genes

(2007) Guido Fritzsch et al.   JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION