Comprehensive characterization of horse genome variation by whole-genome sequencing of 88 horses

Elevated Proportions of Deleterious Genetic Variation in Domestic Animals and Plants

(2018) Takashi Makino et al.   Genome Biology and Evolution

Optimized detection of insertions/deletions (INDELs) in whole-exome sequencing data

(2017) Bo-Young Kim et al.   PLoS One

Mapping and phasing of structural variation in patient genomes using nanopore sequencing

(2017) Mircea Cretu Stancu et al.   Nature Communications

NGS-based reverse genetic screen for common embryonic lethal mutations compromising fertility in livestock

(2016) Carole Charlier et al.   GENOME RESEARCH

Discovery and genotyping of structural variation from long-read haploid genome sequence data

(2016) John Huddleston et al.   GENOME RESEARCH

Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes

(2015) Ashutosh Das et al.   BMC GENOMICS

Domestic animals as models for biomedical research

(2015) Leif Andersson   UPSALA JOURNAL OF MEDICAL SCIENCES

Toward better understanding of artifacts in variant calling from high-coverage samples

(2014) Heng Li   BIOINFORMATICS

Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls

(2014) Justin M Zook et al.   NATURE BIOTECHNOLOGY

Deleterious- and Disease-Allele Prevalence in Healthy Individuals: Insights from Current Predictions, Mutation Databases, and Population-Scale Resequencing

(2012) Yali Xue et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Inactivation of Palb2 gene leads to mesoderm differentiation defect and early embryonic lethality in mice

(2010) Pia Rantakari et al.   HUMAN MOLECULAR GENETICS

Genome Sequence, Comparative Analysis, and Population Genetics of the Domestic Horse

(2009) C. M. Wade et al.   SCIENCE