Single cell genomes of Prochlorococcus, Synechococcus, and sympatric microbes from diverse marine environments
出版年份 2018 全文链接
标题
Single cell genomes of Prochlorococcus, Synechococcus, and sympatric microbes from diverse marine environments
作者
关键词
-
出版物
Scientific Data
Volume 5, Issue -, Pages 180154
出版商
Springer Nature America, Inc
发表日期
2018-09-04
DOI
10.1038/sdata.2018.154
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Fundamental differences in diversity and genomic population structure between Atlantic and Pacific Prochlorococcus
- (2017) Nadav Kashtan et al. ISME Journal
- panX: pan-genome analysis and exploration
- (2017) Wei Ding et al. NUCLEIC ACIDS RESEARCH
- Metabolic evolution and the self-organization of ecosystems
- (2017) Rogier Braakman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
- (2017) Ramunas Stepanauskas et al. Nature Communications
- Global genetic capacity for mixotrophy in marine picocyanobacteria
- (2016) Alexis P Yelton et al. ISME Journal
- IMG/M: integrated genome and metagenome comparative data analysis system
- (2016) I-Min A. Chen et al. NUCLEIC ACIDS RESEARCH
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- Prochlorococcus: the structure and function of collective diversity
- (2014) Steven J. Biller et al. NATURE REVIEWS MICROBIOLOGY
- GEOTRACES: Changing the Way We Explore Ocean Chemistry
- (2014) Robert Anderson et al. OCEANOGRAPHY
- PhyloSift: phylogenetic analysis of genomes and metagenomes
- (2014) Aaron E. Darling et al. PeerJ
- Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus
- (2014) Steven J. Biller et al. Scientific Data
- Stabilizing the foundation of the house that ‘omics builds: the evolving value of cultured isolates to marine microbiology
- (2013) Michael S Rappé CURRENT OPINION IN MICROBIOLOGY
- Dynamic biogeochemical provinces in the global ocean
- (2013) Gabriel Reygondeau et al. GLOBAL BIOGEOCHEMICAL CYCLES
- Genetic diversity in cultured and wild marine cyanomyoviruses reveals phosphorus stress as a strong selective agent
- (2013) Libusha Kelly et al. ISME Journal
- Insights into the phylogeny and coding potential of microbial dark matter
- (2013) Christian Rinke et al. NATURE
- IMG 4 version of the integrated microbial genomes comparative analysis system
- (2013) Victor M. Markowitz et al. NUCLEIC ACIDS RESEARCH
- Ribosomal Database Project: data and tools for high throughput rRNA analysis
- (2013) James R. Cole et al. NUCLEIC ACIDS RESEARCH
- Effect of Temperature on Photosynthesis and Growth in Marine Synechococcus spp.
- (2013) K. R. M. Mackey et al. PLANT PHYSIOLOGY
- Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
- (2013) Dongying Wu et al. PLoS One
- Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus
- (2013) P. Flombaum et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean
- (2013) B. K. Swan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Infinitely Many Genes Model for the Distributed Genome of Bacteria
- (2012) Franz Baumdicker et al. Genome Biology and Evolution
- The virocell concept and environmental microbiology
- (2012) Patrick Forterre ISME Journal
- Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis
- (2012) Rex R Malmstrom et al. ISME Journal
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria
- (2012) Jana Grote et al. Standards in Genomic Sciences
- DECIPHER, a Search-Based Approach to Chimera Identification for 16S rRNA Sequences
- (2011) Erik S. Wright et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Adaptive seeds tame genomic sequence comparison
- (2011) S. M. Kielbasa et al. GENOME RESEARCH
- Dependence of the Cyanobacterium Prochlorococcus on Hydrogen Peroxide Scavenging Microbes for Growth at the Ocean's Surface
- (2011) J. Jeffrey Morris et al. PLoS One
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- Complete Genome Sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a Representative of the SAR116 Clade in the Alphaproteobacteria
- (2010) H.-M. Oh et al. JOURNAL OF BACTERIOLOGY
- How Many Bootstrap Replicates Are Necessary?
- (2010) Nicholas D. Pattengale et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Prochlorococcus: Advantages and Limits of Minimalism
- (2009) Frédéric Partensky et al. Annual Review of Marine Science
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- A Rapid Bootstrap Algorithm for the RAxML Web Servers
- (2008) Alexandros Stamatakis et al. SYSTEMATIC BIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now