Integrating neuroinformatics tools in TheVirtualBrain

Resting-State Functional Connectivity Emerges from Structurally and Dynamically Shaped Slow Linear Fluctuations

(2013) G. Deco et al.   JOURNAL OF NEUROSCIENCE

Systematic approximations of neural fields through networks of neural masses in the virtual brain

(2013) A. Spiegler et al.   NEUROIMAGE

MNE software for processing MEG and EEG data

(2013) Alexandre Gramfort et al.   NEUROIMAGE

The Virtual Brain: a simulator of primate brain network dynamics

(2013) Paula Sanz Leon et al.   Frontiers in Neuroinformatics

Human cortical connectome reconstruction from diffusion weighted MRI: The effect of tractography algorithm

(2012) Matteo Bastiani et al.   NEUROIMAGE

A Large-Scale Model of the Functioning Brain

(2012) C. Eliasmith et al.   SCIENCE

How anatomy shapes dynamics: a semi-analytical study of the brain at rest by a simple spin model

(2012) Gustavo Deco et al.   Frontiers in Computational Neuroscience

Role of local network oscillations in resting-state functional connectivity

(2011) Joana Cabral et al.   NEUROIMAGE

PyCUDA and PyOpenCL: A scripting-based approach to GPU run-time code generation

(2011) Andreas Klöckner et al.   PARALLEL COMPUTING

Reduced representations of heterogeneous mixed neural networks with synaptic coupling

(2011) Roxana A. Stefanescu et al.   PHYSICAL REVIEW E

Nipype: A Flexible, Lightweight and Extensible Neuroimaging Data Processing Framework in Python

(2011) Krzysztof Gorgolewski et al.   Frontiers in Neuroinformatics

OpenMEEG: opensource software for quasistatic bioelectromagnetics

(2010) Alexandre Gramfort et al.   Biomedical Engineering Online

Emerging concepts for the dynamical organization of resting-state activity in the brain

(2010) Gustavo Deco et al.   NATURE REVIEWS NEUROSCIENCE

Bifurcation analysis of neural mass models: Impact of extrinsic inputs and dendritic time constants

(2010) Andreas Spiegler et al.   NEUROIMAGE

Large-scale neural dynamics: Simple and complex

(2010) S. Coombes   NEUROIMAGE

The Brian simulator

(2010) Dan F M. Goodman   Frontiers in Neuroscience

Complex network measures of brain connectivity: Uses and interpretations

(2009) Mikail Rubinov et al.   NEUROIMAGE

Key role of coupling, delay, and noise in resting brain fluctuations

(2009) G. Deco et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Predicting human resting-state functional connectivity from structural connectivity

(2009) C. J. Honey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

G-Node: An integrated tool-sharing platform to support cellular and systems neurophysiology in the age of global neuroinformatics

(2008) Andreas V.M. Herz et al.   NEURAL NETWORKS

Mapping the Structural Core of Human Cerebral Cortex

(2008) Patric Hagmann et al.   PLOS BIOLOGY

The Dynamic Brain: From Spiking Neurons to Neural Masses and Cortical Fields

(2008) Gustavo Deco et al.   PLoS Computational Biology

A Low Dimensional Description of Globally Coupled Heterogeneous Neural Networks of Excitatory and Inhibitory Neurons

(2008) Roxana A. Stefanescu et al.   PLoS Computational Biology

Noise during Rest Enables the Exploration of the Brain's Dynamic Repertoire

(2008) Anandamohan Ghosh et al.   PLoS Computational Biology