Draft genome sequences of five recent human uropathogenicEscherichia coliisolates

Preventing urinary tract infection: progress toward an effectiveEscherichia colivaccine

(2012) Ariel R Brumbaugh et al.   Expert Review of Vaccines

Lethal inflammasome activation by a multidrug-resistant pathobiont upon antibiotic disruption of the microbiota

(2012) Janelle S Ayres et al.   NATURE MEDICINE

Uncomplicated Urinary Tract Infection

(2012) Thomas M. Hooton   NEW ENGLAND JOURNAL OF MEDICINE

International Clinical Practice Guidelines for the Treatment of Acute Uncomplicated Cystitis and Pyelonephritis in Women: A 2010 Update by the Infectious Diseases Society of America and the European Society for Microbiology and Infectious Diseases

(2011) Kalpana Gupta et al.   CLINICAL INFECTIOUS DISEASES

Escherichia coli physiology and metabolism dictates adaptation to diverse host microenvironments

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(2011) Alexander R. C. Wong et al.   MOLECULAR MICROBIOLOGY

Mugsy: fast multiple alignment of closely related whole genomes

(2010) Samuel V. Angiuoli et al.   BIOINFORMATICS

A Comparative Genomic Analysis of Diverse Clonal Types of EnterotoxigenicEscherichia coliReveals Pathovar-Specific Conservation

(2010) Jason W. Sahl et al.   INFECTION AND IMMUNITY

Complete Genome Sequence and Comparative Metabolic Profiling of the Prototypical Enteroaggregative Escherichia coli Strain 042

(2010) Roy R. Chaudhuri et al.   PLoS One

Escherichia coli Global Gene Expression in Urine from Women with Urinary Tract Infection

(2010) Erin C. Hagan et al.   PLoS Pathogens

A Module Located at a Chromosomal Integration Hot Spot Is Responsible for the Multidrug Resistance of a Reference Strain from Escherichia coli Clonal Group A

(2009) M. Lescat et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Genomic Islands of Uropathogenic Escherichia coli Contribute to Virulence

(2009) A. L. Lloyd et al.   JOURNAL OF BACTERIOLOGY

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer

(2008) D. Hernandez et al.   GENOME RESEARCH

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

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