Developing market class specific InDel markers from next generation sequence data in Phaseolus vulgaris L.

Development of indel markers from Citrus clementina (Rutaceae) BAC-end sequences and interspecific transferability in Citrus

(2012) F. Ollitrault et al.   AMERICAN JOURNAL OF BOTANY

PCR Multiplexing for Maximising Genetic Analyses with Limited DNA Samples: An Example in the Collared Flycatcher,Ficedula albicollis

(2012) Nikoletta Karaiskou et al.   ANNALES ZOOLOGICI FENNICI

Application of next-generation sequencing for rapid marker development in molecular plant breeding: a case study on anthracnose disease resistance in Lupinus angustifolius L.

(2012) Huaan Yang et al.   BMC GENOMICS

Demographic factors shaped diversity in the two gene pools of wild common bean Phaseolus vulgaris L.

(2012) S Mamidi et al.   HEREDITY

A collection of INDEL markers for map-based cloning in seven Arabidopsis accessions

(2012) Daniel Ioan Păcurar et al.   JOURNAL OF EXPERIMENTAL BOTANY

Investigation of the domestication of common bean (Phaseolus vulgaris) using multilocus sequence data

(2011) Sujan Mamidi et al.   FUNCTIONAL PLANT BIOLOGY

Discovery and application of insertion-deletion (INDEL) polymorphisms for QTL mapping of early life-history traits in Atlantic salmon

(2010) Anti Vasemägi et al.   BMC GENOMICS

Integration of physical and genetic maps of common bean through BAC-derived microsatellite markers

(2010) Juana M Córdoba et al.   BMC GENOMICS

Evaluation of diversity among common beans (Phaseolus vulgaris L.) from two centers of domestication using 'omics' technologies

(2010) Meghan M Mensack et al.   BMC GENOMICS

High-throughput SNP discovery and assay development in common bean

(2010) David L Hyten et al.   BMC GENOMICS

A platform of high-density INDEL/CAPS markers for map-based cloning in Arabidopsis

(2010) Xianhui Hou et al.   PLANT JOURNAL

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

(2009) Daniel C. Koboldt et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Single strand conformation polymorphism based SNP and Indel markers for genetic mapping and synteny analysis of common bean (Phaseolus vulgaris L.)

(2009) Carlos H Galeano et al.   BMC GENOMICS

Orphan legume crops enter the genomics era!

(2009) Rajeev K Varshney et al.   CURRENT OPINION IN PLANT BIOLOGY

BatchPrimer3: A high throughput web application for PCR and sequencing primer design

(2008) Frank M You et al.   BMC BIOINFORMATICS

Insertion-deletion polymorphisms (indels) as genetic markers in natural populations

(2008) Ülo Väli et al.   BMC GENETICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

(2008) J. CRISTOBAL VERA et al.   MOLECULAR ECOLOGY

BAC-end Sequence Analysis and a Draft Physical Map of the Common Bean (Phaseolus vulgaris L.) Genome

(2008) Jessica A. Schlueter et al.   Tropical Plant Biology

InDel markers distinguish Basmatis from other fragrant rice varieties

(2007) Katherine A. Steele et al.   FIELD CROPS RESEARCH