Detection by Direct Next Generation Sequencing Analysis of Emerging Enterovirus D68 and C109 Strains in an Environmental Sample From Scotland
出版年份 2018 全文链接
标题
Detection by Direct Next Generation Sequencing Analysis of Emerging Enterovirus D68 and C109 Strains in an Environmental Sample From Scotland
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 9, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2018-08-21
DOI
10.3389/fmicb.2018.01956
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- The association between acute flaccid myelitis (AFM) and Enterovirus D68 (EV-D68) – what is the evidence for causation?
- (2018) Amalie Dyda et al. Eurosurveillance
- Recommendations for enterovirus diagnostics and characterisation within and beyond Europe
- (2018) Heli Harvala et al. JOURNAL OF CLINICAL VIROLOGY
- Enterovirus D68 and acute flaccid myelitis—evaluating the evidence for causality
- (2018) Kevin Messacar et al. LANCET INFECTIOUS DISEASES
- Metagenomics for the study of viruses in urban sewage as a tool for public health surveillance
- (2018) X. Fernandez-Cassi et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Identification and whole-genome characterization of a recombinant Enterovirus B69 isolated from a patient with Acute Flaccid Paralysis in Niger, 2015
- (2018) Maria Dolores Fernandez-Garcia et al. Scientific Reports
- Letter to the editor: Need for a European network for enterovirus D68 surveillance after detections of EV-D68 of the new B3 lineage in Sweden and Italy, 2016
- (2017) Elena Pariani et al. Eurosurveillance
- Co-circulation of multiple subtypes of enterovirus A71 (EV- A71) genotype C, including novel recombinants characterised by use of whole genome sequencing (WGS), Denmark 2016
- (2017) Sofie E Midgley et al. Eurosurveillance
- Human enterovirus D68 in clinical and sewage samples in Israel
- (2017) Merav Weil et al. JOURNAL OF CLINICAL VIROLOGY
- An enhanced Enterovirus surveillance system allows identification and characterization of rare and emerging respiratory enteroviruses in Denmark, 2015–16
- (2017) Céline Barnadas et al. JOURNAL OF CLINICAL VIROLOGY
- Isolation of Vaccine-Like Poliovirus Strains in Sewage Samples From the United Kingdom
- (2017) Manasi Majumdar et al. JOURNAL OF INFECTIOUS DISEASES
- Retrospective Surveillance of Wastewater To Examine Seasonal Dynamics of Enterovirus Infections
- (2017) Nichole E. Brinkman et al. mSphere
- Enterovirus D68 Subclade B3 Strain Circulating and Causing an Outbreak in the United States in 2016
- (2017) Guiqing Wang et al. Scientific Reports
- Identification and molecular characterization of non-polio enteroviruses from children with acute flaccid paralysis in West Africa, 2013–2014
- (2017) Maria D. Fernandez-Garcia et al. Scientific Reports
- Environmental surveillance of viruses by tangential flow filtration and metagenomic reconstruction
- (2016) Vyacheslav Furtak et al. Eurosurveillance
- Outbreak of enterovirus D68 of the new B3 lineage in Stockholm, Sweden, August to September 2016
- (2016) Robert Dyrdak et al. Eurosurveillance
- Newly Identified Enterovirus C Genotypes, Identified in the Netherlands through Routine Sequencing of All Enteroviruses Detected in Clinical Materials from 2008 to 2015
- (2016) Coretta C. Van Leer-Buter et al. JOURNAL OF CLINICAL MICROBIOLOGY
- High-Throughput Next-Generation Sequencing of Polioviruses
- (2016) Anna M. Montmayeur et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Global emergence of enterovirus D68: a systematic review
- (2016) Charlotte Carina Holm-Hansen et al. LANCET INFECTIOUS DISEASES
- Molecular evolution and the global reemergence of enterovirus D68 by genome-wide analysis
- (2016) Yu-Nong Gong et al. MEDICINE
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Temporal dynamics of norovirus determined through monitoring of municipal wastewater by pyrosequencing and virological surveillance of gastroenteritis cases
- (2016) Shinobu Kazama et al. WATER RESEARCH
- VirusTAP: Viral Genome-Targeted Assembly Pipeline
- (2016) Akifumi Yamashita et al. Frontiers in Microbiology
- Whole Genome Sequencing of Enterovirus species C Isolates by High-Throughput Sequencing: Development of Generic Primers
- (2016) Maël Bessaud et al. Frontiers in Microbiology
- Deciphering the Diversities of Astroviruses and Noroviruses in Wastewater Treatment Plant Effluents by a High-Throughput Sequencing Method
- (2015) B. Prevost et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Enterovirus Species B Bias of RD Cell Line and Its Influence on Enterovirus Diversity Landscape
- (2015) Temitope Oluwasegun Cephas Faleye et al. Food and Environmental Virology
- Human Adenovirus Diversity in Water Samples Using a Next-Generation Amplicon Sequencing Approach
- (2015) Leslie Ogorzaly et al. Food and Environmental Virology
- Whole-Genome Sequence Analysis Reveals the Enterovirus D68 Isolates during the United States 2014 Outbreak Mainly Belong to a Novel Clade
- (2015) Weihua Huang et al. Scientific Reports
- Enterovirus infections in England and Wales, 2000–2011: the impact of increased molecular diagnostics
- (2014) S. Kadambari et al. CLINICAL MICROBIOLOGY AND INFECTION
- Comparison of diagnostic clinical samples and environmental sampling for enterovirus and parechovirus surveillance in Scotland, 2010 to 2012
- (2014) H Harvala et al. Eurosurveillance
- Development of an Efficient Entire-Capsid-Coding-Region Amplification Method for Direct Detection of Poliovirus from Stool Extracts
- (2014) Minetaro Arita et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Exploring the Potential of Next-Generation Sequencing in Detection of Respiratory Viruses
- (2014) S. Prachayangprecha et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Environmental Surveillance for Polioviruses in the Global Polio Eradication Initiative
- (2014) H. Asghar et al. JOURNAL OF INFECTIOUS DISEASES
- Newly emerging C group enteroviruses may elude diagnosis due to a divergent 5′-UTR
- (2013) Jan Richter et al. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES
- Human enterovirus 109 (EV109) in acute paediatric respiratory disease in Hungary
- (2012) Péter Pankovics et al. ACTA MICROBIOLOGICA ET IMMUNOLOGICA HUNGARICA
- Picornavirus and enterovirus diversity with associated human diseases
- (2012) Caroline Tapparel et al. INFECTION GENETICS AND EVOLUTION
- Novel serotypes 105 and 116 are members of distinct subgroups of Human enterovirus C
- (2012) A. N. Lukashev et al. JOURNAL OF GENERAL VIROLOGY
- Genomic analysis of two novel human enterovirus C genotypes found in respiratory samples from Peru
- (2012) R. Tokarz et al. JOURNAL OF GENERAL VIROLOGY
- Complete Genome Sequence of a Novel Human Enterovirus C (HEV-C117) Identified in a Child with Community-Acquired Pneumonia
- (2012) C. Daleno et al. JOURNAL OF VIROLOGY
- High Variety of Known and New RNA and DNA Viruses of Diverse Origins in Untreated Sewage
- (2012) T. F. F. Ng et al. JOURNAL OF VIROLOGY
- Bayesian Phylogenetics with BEAUti and the BEAST 1.7
- (2012) Alexei J. Drummond et al. MOLECULAR BIOLOGY AND EVOLUTION
- Epidemiological, molecular and clinical features of Enterovirus 109 infection in children and in adult stem cell transplant recipients
- (2012) Maurizia Debiaggi et al. Virology Journal
- Evolutionary Dynamics of Local Pandemic H1N1/2009 Influenza Virus Lineages Revealed by Whole-Genome Analysis
- (2011) G. J. Baillie et al. JOURNAL OF VIROLOGY
- Human Enterovirus 109: a Novel Interspecies Recombinant Enterovirus Isolated from a Case of Acute Pediatric Respiratory Illness in Nicaragua
- (2010) N. L. Yozwiak et al. JOURNAL OF VIROLOGY
- Viral Nucleic Acids in Live-Attenuated Vaccines: Detection of Minority Variants and an Adventitious Virus
- (2010) J. G. Victoria et al. JOURNAL OF VIROLOGY
- Tracking the Evolution of Multiple In Vitro Hepatitis C Virus Replicon Variants under Protease Inhibitor Selection Pressure by 454 Deep Sequencing
- (2010) T. Verbinnen et al. JOURNAL OF VIROLOGY
- Multiple novel astrovirus species in human stool
- (2009) A. Kapoor et al. JOURNAL OF GENERAL VIROLOGY
- Metagenomic Analyses of Viruses in Stool Samples from Children with Acute Flaccid Paralysis
- (2009) J. G. Victoria et al. JOURNAL OF VIROLOGY
- A New Arenavirus in a Cluster of Fatal Transplant-Associated Diseases
- (2008) Gustavo Palacios et al. NEW ENGLAND JOURNAL OF MEDICINE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started