4.6 Article

Biogeographic congruency among bacterial communities from terrestrial sulfidic springs

期刊

FRONTIERS IN MICROBIOLOGY
卷 5, 期 -, 页码 -

出版社

FRONTIERS MEDIA SA
DOI: 10.3389/fmicb.2014.00473

关键词

sulfur-oxidizing bacteria; microbiome; biogeography; Epsilonproteobacteria; Gammaproteobacteria; 16S rRNA

资金

  1. National Science Foundation [DEB-0640835]

向作者/读者索取更多资源

Terrestrial sulfidic springs support diverse microbial communities by serving as stable conduits for geochemically diverse and nutrient-rich subsurface waters. Microorganisms that colonize terrestrial springs likely originate from groundwater, but may also be sourced from the surface. As such, the biogeographic distribution of microbial communities inhabiting sulfidic springs should be controlled by a combination of spring geochemistry and surface and subsurface transport mechanisms, and not necessarily geographic proximity to other springs. We examined the bacterial diversity of seven springs to test the hypothesis that occurrence of taxonomically similar microbes, important to the sulfur cycle, at each spring is controlled by geochemistry. Complementary Sanger sequencing and 454 pyrosequencing of 16S rRNA genes retrieved five proteobacterial classes, and Bacteroidetes, Chlorobi, Chloroflexi, and Firmicutes phyla from all springs, which suggested the potential for a core sulfidic spring microbiome. Among the putative sulfide-oxidizing groups (Epsilonproteobacteria and Gammaproteobacteria), up to 83% of the sequences from geochemically similar springs clustered together. Abundant populations of Hydrogenimonas-like or Sulfurovum-like spp. (Epsilonproteobacteria) occurred with abundant Thiothrix and Thiofaba spp. (Gammaproteobacteria), but Arcobacter-like and Sulfurimonas spp. (Epsilonproteobacteria) occurred with less abundant gammaproteobacterial populations. These distribution patterns confirmed that geochemistry rather than biogeography regulates bacterial dominance at each spring. Potential biogeographic controls were related to paleogeologic sedimentation patterns that could control long-term microbial transport mechanisms that link surface and subsurface environments. Knowing the composition of a core sulfidic spring microbial community could provide a way to monitor diversity changes if a system is threatened by anthropogenic processes or climate change.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.6
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Environmental Sciences

Thermophilic Archaeal Diversity and Methanogenesis from El Tatio Geyser Field, Chile

Megan F. Plenge, Annette S. Engel, Christopher R. Omelon, Philip C. Bennett

GEOMICROBIOLOGY JOURNAL (2017)

Article Biodiversity Conservation

Rediscovery and conservation status of six short-range endemic Pseudanophthalmus cave beetles (Carabidae: Trechini)

Matthew L. Niemiller, Kirk S. Zigler, Karen A. Ober, Evin T. Carter, Annette S. Engel, Gerald Moni, T. Keith Philips, Charles D. R. Stephen

INSECT CONSERVATION AND DIVERSITY (2017)

Article Geography, Physical

Reconstructing diagenetic conditions of bone at the Gray Fossil Site, Tennessee, USA

Sarah W. Keenan, Annette Summers Engel

PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY (2017)

Article Ecology

Taxonomic and functional heterogeneity of the gill microbiome in a symbiotic coastal mangrove lucinid species

Shen Jean Lim, Brenton G. Davis, Danielle E. Gill, Jillian Walton, Erika Nachman, Annette Summers Engel, Laurie C. Anderson, Barbara J. Campbell

ISME JOURNAL (2019)

Article Geosciences, Multidisciplinary

KARST SPRING MICROBIAL DIVERSITY DIFFERS ACROSS AN OXYGEN-SULPHIDE ECOCLINE AND REVEALS POTENTIAL FOR NOVEL TAXA DISCOVERY

Janez Mulec, Annette Summers Engel

ACTA CARSOLOGICA (2019)

Article Microbiology

Extensive Thioautotrophic Gill Endosymbiont Diversity within a Single Ctena orbiculata (Bivalvia: Lucinidae) Population and Implications for Defining Host-Symbiont Specificity and Species Recognition

Shen Jean Lim, Louie Alexander, Annette Summers Engel, Audrey T. Paterson, Laurie C. Anderson, Barbara J. Campbell

MSYSTEMS (2019)

Correction Ecology

Taxonomic and functional heterogeneity of the gill microbiome in a symbiotic coastal mangrove lucinid species (vol 128, pg 765, 2020)

Shen Jean Lim, Brenton G. Davis, Danielle E. Gill, Jillian Walton, Erika Nachman, Annette Summers Engel, Laurie C. Anderson, Barbara J. Campbell

ISME JOURNAL (2020)

Article Zoology

A new species of stygobitic snail in the genus Antrorbis Hershier & Thompson, 1990 (Gastropoda, Cochliopidae) from the Appalachian Valley and Ridge of eastern Tennessee, USA

Nicholas S. Gladstone, Kathryn E. Perez, Evelyn B. Pieper, Evin T. Carter, Katherine E. Dooley, Nathaniel F. Shoobs, Annette S. Engel, Matthew L. Niemiller

ZOOKEYS (2019)

Article Geosciences, Multidisciplinary

BIODIVERSITY FROM CAVES AND OTHER SUBTERRANEAN HABITATS OF GEORGIA, USA

Kirk S. Zigler, Matthew L. Niemiller, Charles D. R. Stephen, Breanne N. Ayala, Marc A. Milne, Nicholas S. Gladstone, Annette S. Engel, John B. Jensen, Carlos D. Camp, James C. Ozier, Alan Cressler

JOURNAL OF CAVE AND KARST STUDIES (2020)

Article Microbiology

Gill microbiome structure and function in the chemosymbiotic coastal lucinid Stewartia floridana

Shen Jean Lim, Brenton Davis, Danielle Gill, John Swetenburg, Laurie C. Anderson, Annette Summers Engel, Barbara J. Campbell

Summary: Lucinid bivalves harbor environmentally acquired, chemosynthetic, gammaproteobacterial gill endosymbionts. Our analysis of the microbiome content of Stewartia floridana collected from Florida revealed a monospecific gammaproteobacterial endosymbiont and a low-abundance Spirochaeta-like species, indicating possible facultative association with scavenging and nutrient cycling roles. The expressed genes of the symbionts and host suggest species-species communications and the need for further study of interactions in the lucinid hosts, their microbiomes, and the environment.

FEMS MICROBIOLOGY ECOLOGY (2021)

Article Ecology

Live and Live-Dead Intraspecific Morphometric Comparisons as Proxies for Seagrass Stability in Conservation Paleobiology

Laurie C. Anderson, Brooke L. Long-Fox, Audrey T. Paterson, Annette S. Engel

Summary: This study tested the potential of geometric morphometric data from live and dead S. floridana to serve as proxies for seagrass occurrence and stability. The results showed that live S. floridana shape was significantly correlated with seagrass taxonomic composition and percent cover at the time of collection, while dead shell shape was related to seagrass stability over a six-year period.

FRONTIERS IN ECOLOGY AND EVOLUTION (2022)

Article Ecology

Can biodiversity of preexisting and created salt marshes match across scales? An assessment from microbes to predators

Friedrich W. Keppeler, James R. Junker, Margaret J. Shaw, Scott B. Alford, Annette S. Engel, Linda M. Hooper-Bui, Olaf P. Jensen, Katelyn Lamb, Paola C. Lopez-Duarte, Charles W. Martin, Ashley M. McDonald, Jill A. Olin, Audrey T. Paterson, Michael J. Polito, Nancy N. Rabalais, Brian J. Roberts, Ryann E. Rossi, Erick M. Swenson

Summary: Coastal wetlands are disappearing rapidly due to climate change and flood control measures. The study compares the biodiversity of different assemblages between created marshes and reference marshes. The results suggest generally similar taxonomic diversity and composition between created and reference marshes, supporting the use of marsh habitat for coastal biodiversity restoration.

ECOSPHERE (2023)

Article Zoology

DISTRIBUTION, ECOLOGY, LIFE HISTORY, AND CONSERVATION STATUS OF THE BERRY CAVE SALAMANDER (GYRINOPHILUS GULOLINEATUS)

Matthew L. Niemiller, Evin T. Carter, Nicholas S. Gladstone, K. Denise Kendall Niemiller, Lindsey E. Hayter, Annette S. Engel, Brian T. Miller, Benjamin M. Fitzpatrick

Summary: Berry Cave Salamanders are a rare endemic species in eastern Tennessee, USA. Surveys revealed a decline in population abundance in certain caves, primarily due to habitat degradation and groundwater contamination.

HERPETOLOGICAL CONSERVATION AND BIOLOGY (2021)

Article Geosciences, Multidisciplinary

CAVE HYGROPETRIC BEETLES AND THEIR FEEDING BEHAVIOUR, A COMPARATIVE STUDY OF CANSILIELLA SERVADEII AND HADESIA ASAMO (COLEOPTERA, CHOLEVINAE, LEPTODIRINI)

Luca Dorigo, Andrea Squartini, Vladimiro Toniello, Angelo Leandro Dreon, Alberto Pamio, Giorgio Concina, Venicio Simonutti, Enrico Ruzzier, Michel Perreau, Annette Summers Engel, Federico Gavinelli, Isabel Martinez-Sanudo, Luca Mazzon, Maurizio G. Paoletti

ACTA CARSOLOGICA (2017)

Article Biotechnology & Applied Microbiology

Salt Marsh Bacterial Communities before and after the Deepwater Horizon Oil Spill

Annette Summers Engel, Chang Liu, Audrey T. Paterson, Laurie C. Anderson, R. Eugene Turner, Edward B. Overton

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2017)

暂无数据