The Roles of Competition and Mutation in Shaping Antigenic and Genetic Diversity in Influenza

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mapping of H3N2 influenza antigenic evolution in China reveals a strategy for vaccine strain recommendation

(2012) Xiangjun Du et al.   Nature Communications

Changed epitopes drive the antigenic drift for influenza A (H3N2) viruses

(2011) Jhang-Wei Huang et al.   BMC BIOINFORMATICS

Strength and tempo of selection revealed in viral gene genealogies

(2011) Trevor Bedford et al.   BMC EVOLUTIONARY BIOLOGY

Complex Population Dynamics and the Coalescent Under Neutrality

(2011) Erik M. Volz   GENETICS

Does Glycosylation as a modifier of Original Antigenic Sin explain the case age distribution and unusual toxicity in pandemic novel H1N1 influenza?

(2010) Tom Reichert et al.   BMC INFECTIOUS DISEASES

Preexisting Antibody Response against 2009 Pandemic Influenza H1N1 Viruses in the Taiwanese Population

(2010) C.-Y. Chi et al.   Clinical and Vaccine Immunology

Time Series Analysis of Incidence Data of Influenza in Japan

(2010) Ayako Sumi et al.   JOURNAL OF EPIDEMIOLOGY

Intraseasonal Dynamics and Dominant Sequences in H3N2 Influenza

(2010) Nicole Creanza et al.   PLoS One

Risk Factors and Immunity in a Nationally Representative Population following the 2009 Influenza A(H1N1) Pandemic

(2010) Don Bandaranayake et al.   PLoS One

Global Migration Dynamics Underlie Evolution and Persistence of Human Influenza A (H3N2)

(2010) Trevor Bedford et al.   PLoS Pathogens

Broadly Protective Monoclonal Antibodies against H3 Influenza Viruses following Sequential Immunization with Different Hemagglutinins

(2010) Taia T. Wang et al.   PLoS Pathogens

Detecting natural selection in RNA virus populations using sequence summary statistics

(2009) Samir Bhatt et al.   INFECTION GENETICS AND EVOLUTION

Incorporating demographic stochasticity into multi-strain epidemic models: application to influenza A

(2009) P. Minayev et al.   Journal of the Royal Society Interface

Cross-Reactive Antibody Responses to the 2009 Pandemic H1N1 Influenza Virus

(2009) Kathy Hancock et al.   NEW ENGLAND JOURNAL OF MEDICINE

Hemagglutinin Receptor Binding Avidity Drives Influenza A Virus Antigenic Drift

(2009) S. E. Hensley et al.   SCIENCE

Bayesian Phylogeography Finds Its Roots

(2009) Philippe Lemey et al.   PLoS Computational Biology

Modelling and prediction of weekly incidence of influenza A specimens in England and Wales

(2008) J. ŠALTYTĖ BENTH et al.   EPIDEMIOLOGY AND INFECTION

Positive selection operates continuously on hemagglutinin during evolution of H3N2 human influenza A virus

(2008) Yoshiyuki Suzuki   GENE

The genomic and epidemiological dynamics of human influenza A virus

(2008) Andrew Rambaut et al.   NATURE

Role of selection in the emergence of lineages and the evolution of virulence in Neisseria meningitidis

(2008) C. O. Buckee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Global Circulation of Seasonal Influenza A (H3N2) Viruses

(2008) C. A. Russell et al.   SCIENCE