Comparison of Methods to Account for Relatedness in Genome-Wide Association Studies with Family-Based Data

MASTOR: Mixed-Model Association Mapping of Quantitative Traits in Samples with Related Individuals

(2013) Johanna Jakobsdottir et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Efficient computation with a linear mixed model on large-scale data sets with applications to genetic studies

(2013) Matti Pirinen et al.   Annals of Applied Statistics

Mendel: the Swiss army knife of genetic analysis programs

(2013) Kenneth Lange et al.   BIOINFORMATICS

An Analytical Comparison of the Principal Component Method and the Mixed Effects Model for Association Studies in the Presence of Cryptic Relatedness and Population Stratification

(2013) Kai Wang et al.   HUMAN HEREDITY

Common variants in the HLA-DRB1–HLA-DQA1 HLA class II region are associated with susceptibility to visceral leishmaniasis

(2013) Michaela Fakiola et al.   NATURE GENETICS

The benefits of selecting phenotype-specific variants for applications of mixed models in genomics

(2013) Christoph Lippert et al.   Scientific Reports

Improved Heritability Estimation from Genome-wide SNPs

(2012) Doug Speed et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genome-Wide Association Mapping With Longitudinal Data

(2012) Nicholas A. Furlotte et al.   GENETIC EPIDEMIOLOGY

Rapid variance components–based method for whole-genome association analysis

(2012) Gulnara R Svishcheva et al.   NATURE GENETICS

Genome-wide efficient mixed-model analysis for association studies

(2012) Xiang Zhou et al.   NATURE GENETICS

Improved linear mixed models for genome-wide association studies

(2012) Jennifer Listgarten et al.   NATURE METHODS

A Flexible Model for Association Analysis in Sibships with Missing Genotype Data

(2011) Frank Dudbridge et al.   ANNALS OF HUMAN GENETICS

Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis

(2011) Stephen Sawcer et al.   NATURE

FaST linear mixed models for genome-wide association studies

(2011) Christoph Lippert et al.   NATURE METHODS

ROADTRIPS: Case-Control Association Testing with Partially or Completely Unknown Population and Pedigree Structure

(2010) Timothy Thornton et al.   AMERICAN JOURNAL OF HUMAN GENETICS

GCTA: A Tool for Genome-wide Complex Trait Analysis

(2010) Jian Yang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Robust relationship inference in genome-wide association studies

(2010) Ani Manichaikul et al.   BIOINFORMATICS

Mixed linear model approach adapted for genome-wide association studies

(2010) Zhiwu Zhang et al.   NATURE GENETICS

Variance component model to account for sample structure in genome-wide association studies

(2010) Hyun Min Kang et al.   NATURE GENETICS

Reconciling the analysis of IBD and IBS in complex trait studies

(2010) Joseph E. Powell et al.   NATURE REVIEWS GENETICS

Population Structure and Cryptic Relatedness in Genetic Association Studies

(2010) William Astle et al.   STATISTICAL SCIENCE

Genetic Admixture in Brazilians Exposed to Infection withLeishmania chagasi

(2009) Nicholas A. Ettinger et al.   ANNALS OF HUMAN GENETICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Efficient Control of Population Structure in Model Organism Association Mapping

(2008) H. M. Kang et al.   GENETICS

Likelihood-Based Association Analysis for Nuclear Families and Unrelated Subjects with Missing Genotype Data

(2008) Frank Dudbridge   HUMAN HEREDITY