An Evolutionary Analysis of Antigen Processing and Presentation across Different Timescales Reveals Pervasive Selection
出版年份 2014 全文链接
标题
An Evolutionary Analysis of Antigen Processing and Presentation across Different Timescales Reveals Pervasive Selection
作者
关键词
Natural selection, Haplotypes, Antigen presentation, Evolutionary genetics, Mammals, Major histocompatibility complex, Evolutionary immunology, Population genetics
出版物
PLoS Genetics
Volume 10, Issue 3, Pages e1004189
出版商
Public Library of Science (PLoS)
发表日期
2014-03-28
DOI
10.1371/journal.pgen.1004189
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Selection and Adaptation in the Human Genome
- (2013) Wenqing Fu et al. Annual Review of Genomics and Human Genetics
- Identifying Recent Adaptations in Large-Scale Genomic Data
- (2013) Sharon R. Grossman et al. CELL
- A cross-platform analysis of 14,177 expression quantitative trait loci derived from lymphoblastoid cell lines
- (2013) L. Liang et al. GENOME RESEARCH
- A 175 Million Year History of T Cell Regulatory Molecules Reveals Widespread Selection, with Adaptive Evolution of Disease Alleles
- (2013) Diego Forni et al. IMMUNITY
- Mechanistic and structural studies on legumain explain its zymogenicity, distinct activation pathways, and regulation
- (2013) E. Dall et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Evolutionary Landscape of Cytosolic Microbial Sensors in Humans
- (2012) Estelle Vasseur et al. AMERICAN JOURNAL OF HUMAN GENETICS
- The putative role of endoplasmic reticulum aminopeptidases in autoimmunity: Insights from genomic-wide association studies
- (2012) Alessandra Fierabracci et al. AUTOIMMUNITY REVIEWS
- rehh: an R package to detect footprints of selection in genome-wide SNP data from haplotype structure
- (2012) Mathieu Gautier et al. BIOINFORMATICS
- Evolution-Guided Identification of Antiviral Specificity Determinants in the Broadly Acting Interferon-Induced Innate Immunity Factor MxA
- (2012) Patrick S. Mitchell et al. Cell Host & Microbe
- Personal and population genomics of human regulatory variation
- (2012) B. Vernot et al. GENOME RESEARCH
- Viral interference with antigen presentation: Trapping TAP
- (2012) Maaike E. Ressing et al. MOLECULAR IMMUNOLOGY
- Hiding Lipid Presentation: Viral Interference with CD1d-Restricted Invariant Natural Killer T (iNKT) Cell Activation
- (2012) Daniëlle Horst et al. Viruses-Basel
- A Genome-Wide Scan of Ashkenazi Jewish Crohn's Disease Suggests Novel Susceptibility Loci
- (2012) Eimear E. Kenny et al. PLoS Genetics
- Detecting Individual Sites Subject to Episodic Diversifying Selection
- (2012) Ben Murrell et al. PLoS Genetics
- Regulation of Insulin-Regulated Membrane Aminopeptidase Activity by Its C-Terminal Domain
- (2011) David B. Ascher et al. BIOCHEMISTRY
- GeCo++: a C++ library for genomic features computation and annotation in the presence of variants
- (2011) M. Cereda et al. BIOINFORMATICS
- PoPMuSiC 2.1: a web server for the estimation of protein stability changes upon mutation and sequence optimality
- (2011) Yves Dehouck et al. BMC BIOINFORMATICS
- Balancing selection is common in the extended MHC region but most alleles with opposite risk profile for autoimmune diseases are neutrally evolving
- (2011) Rachele Cagliani et al. BMC EVOLUTIONARY BIOLOGY
- Evolutionary genetic dissection of human interferons
- (2011) Jérémy Manry et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Cutting Edge: Coding Single Nucleotide Polymorphisms of Endoplasmic Reticulum Aminopeptidase 1 Can Affect Antigenic Peptide Generation In Vitro by Influencing Basic Enzymatic Properties of the Enzyme
- (2011) I. Evnouchidou et al. JOURNAL OF IMMUNOLOGY
- A Random Effects Branch-Site Model for Detecting Episodic Diversifying Selection
- (2011) Sergei L. Kosakovsky Pond et al. MOLECULAR BIOLOGY AND EVOLUTION
- Systematic and Quantitative Assessment of the Ubiquitin-Modified Proteome
- (2011) Woong Kim et al. MOLECULAR CELL
- Germline CYBB mutations that selectively affect macrophages in kindreds with X-linked predisposition to tuberculous mycobacterial disease
- (2011) Jacinta Bustamante et al. NATURE IMMUNOLOGY
- A Population Genetics-Phylogenetics Approach to Inferring Natural Selection in Coding Sequences
- (2011) Daniel J. Wilson et al. PLoS Genetics
- Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology
- (2010) W. Delport et al. BIOINFORMATICS
- Genetic diversity at endoplasmic reticulum aminopeptidases is maintained by balancing selection and is associated with natural resistance to HIV-1 infection
- (2010) R. Cagliani et al. HUMAN MOLECULAR GENETICS
- Trimeric Structure of Langerin
- (2010) Hadar Feinberg et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A Threonine-Based Targeting Signal in the Human CD1d Cytoplasmic Tail Controls Its Functional Expression
- (2010) J. Liu et al. JOURNAL OF IMMUNOLOGY
- Structural Basis for Langerin Recognition of Diverse Pathogen and Mammalian Glycans through a Single Binding Site
- (2010) Hadar Feinberg et al. JOURNAL OF MOLECULAR BIOLOGY
- A map of human genome variation from population-scale sequencing
- (2010) Richard M. Durbin et al. NATURE
- Antigen processing by nardilysin and thimet oligopeptidase generates cytotoxic T cell epitopes
- (2010) Jan H Kessler et al. NATURE IMMUNOLOGY
- A Composite of Multiple Signals Distinguishes Causal Variants in Regions of Positive Selection
- (2010) S. R. Grossman et al. SCIENCE
- Balancing Selection Maintains a Form of ERAP2 that Undergoes Nonsense-Mediated Decay and Affects Antigen Presentation
- (2010) Aida M. Andrés et al. PLoS Genetics
- NA-Seq: A Discovery Tool for the Analysis of Chromatin Structure and Dynamics during Differentiation
- (2009) Gaetano Gargiulo et al. DEVELOPMENTAL CELL
- Insights into MHC Class I Peptide Loading from the Structure of the Tapasin-ERp57 Thiol Oxidoreductase Heterodimer
- (2009) Gang Dong et al. IMMUNITY
- Dual Specificity of Langerin to Sulfated and Mannosylated Glycans via a Single C-type Carbohydrate Recognition Domain
- (2009) Hiroaki Tateno et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Cytosolic Aminopeptidases Influence MHC Class I-Mediated Antigen Presentation in an Allele-Dependent Manner
- (2009) E. Kim et al. JOURNAL OF IMMUNOLOGY
- Targets of Balancing Selection in the Human Genome
- (2009) A. M. Andres et al. MOLECULAR BIOLOGY AND EVOLUTION
- Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions
- (2009) C. Choudhary et al. SCIENCE
- Evolutionary Dynamics of Human Toll-Like Receptors and Their Different Contributions to Host Defense
- (2009) Luis B. Barreiro et al. PLoS Genetics
- The ‘immunologic advantage’ of HIV-exposed seronegative individuals
- (2008) Masaaki Miyazawa et al. AIDS
- EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
- (2008) A. J. Vilella et al. GENOME RESEARCH
- Widespread balancing selection and pathogen-driven selection at blood group antigen genes
- (2008) M. Fumagalli et al. GENOME RESEARCH
- Structure of a Conserved Dimerization Domain within the F-box Protein Fbxo7 and the PI31 Proteasome Inhibitor
- (2008) Rebecca Kirk et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Natural selection has driven population differentiation in modern humans
- (2008) Luis B Barreiro et al. NATURE GENETICS
- Patterns of Positive Selection in Six Mammalian Genomes
- (2008) Carolin Kosiol et al. PLoS Genetics
- Single Residue Determines the Specificity of Neutrophil Elastase for Shigella Virulence Factors
- (2007) Petra Averhoff et al. JOURNAL OF MOLECULAR BIOLOGY
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