Introgression from Domestic Goat Generated Variation at the Major Histocompatibility Complex of Alpine Ibex

Design and Characterization of a 52K SNP Chip for Goats

(2014) Gwenola Tosser-Klopp et al.   PLoS One

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Introgression and the fate of domesticated genes in a wild mammal population

(2013) Philine G. D. Feulner et al.   MOLECULAR ECOLOGY

Adaptive introgression in animals: examples and comparison to new mutation and standing variation as sources of adaptive variation

(2013) Philip W. Hedrick   MOLECULAR ECOLOGY

Genomic signatures of selection at linked sites: unifying the disparity among species

(2013) Asher D. Cutter et al.   NATURE REVIEWS GENETICS

Phenotypic Effects of Cattle Mitochondrial DNA in American Bison

(2012) James N. Derr et al.   CONSERVATION BIOLOGY

New(t)s and views from hybridizing MHC genes: introgression rather than trans-species polymorphism may shape allelic repertoires

(2012) K. MATHIAS WEGNER et al.   MOLECULAR ECOLOGY

Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus)

(2012) Yang Dong et al.   NATURE BIOTECHNOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

Microsatellite-based genotyping of MHC class II DRB1 gene in Iberian and Alpine ibex

(2011) Samer Alasaad et al.   EUROPEAN JOURNAL OF WILDLIFE RESEARCH

Footprints of selection in the ancestral admixture of a New World Creole cattle breed

(2011) MATHIEU GAUTIER et al.   MOLECULAR ECOLOGY

Interspecific hybridization increases MHC class II diversity in two sister species of newts

(2011) KRYSTYNA NADACHOWSKA-BRZYSKA et al.   MOLECULAR ECOLOGY

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Quantitative disease resistance: to better understand parasite-mediated selection on major histocompatibility complex

(2011) H. Westerdahl et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Shaping of Modern Human Immune Systems by Multiregional Admixture with Archaic Humans

(2011) L. Abi-Rached et al.   SCIENCE

Repeated Adaptive Introgression at a Gene under Multiallelic Balancing Selection

(2011) Vincent Castric et al.   PLoS Genetics

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Effects of an MHC-DRB genotype and allele number on the load of gut parasites in the bank voleMyodes glareolus

(2010) AGNIESZKA KLOCH et al.   MOLECULAR ECOLOGY

How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings

(2010) L. G. Spurgin et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Inbreeding in reintroduced populations: the effects of early reintroduction history and contemporary processes

(2009) Iris Biebach et al.   CONSERVATION GENETICS

A strong genetic footprint of the re-introduction history of Alpine ibex (Capra ibex ibex)

(2009) IRIS BIEBACH et al.   MOLECULAR ECOLOGY

Major histocompatibility complex (MHC) heterozygote superiority to natural multi-parasite infections in the water vole (Arvicola terrestris)

(2009) M.K Oliver et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Molecular and Evolutionary History of Melanism in North American Gray Wolves

(2009) T. M. Anderson et al.   SCIENCE

Disentangling the effects of recombination, selection, and demography on the genetic variation at a major histocompatibility complex class II gene in the alpine chamois

(2008) S. MONA et al.   MOLECULAR ECOLOGY

Linkage disequilibrium — understanding the evolutionary past and mapping the medical future

(2008) Montgomery Slatkin   NATURE REVIEWS GENETICS

The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals

(2008) S. Naderi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A new theory of MHC evolution: beyond selection on the immune genes

(2008) C. van Oosterhout   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES