In the Multi-domain Protein Adenylate Kinase, Domain Insertion Facilitates Cooperative Folding while Accommodating Function at Domain Interfaces
出版年份 2014 全文链接
标题
In the Multi-domain Protein Adenylate Kinase, Domain Insertion Facilitates Cooperative Folding while Accommodating Function at Domain Interfaces
作者
关键词
-
出版物
PLoS Computational Biology
Volume 10, Issue 11, Pages e1003938
出版商
Public Library of Science (PLoS)
发表日期
2014-11-14
DOI
10.1371/journal.pcbi.1003938
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- General Mechanism of Two-State Protein Folding Kinetics
- (2014) Geoffrey C. Rollins et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Structural Topology and Activation of an Initial Adenylate Kinase–Substrate Complex
- (2013) Jörgen Ådén et al. BIOCHEMISTRY
- Modulation of a Protein Free-Energy Landscape by Circular Permutation
- (2013) Gaël Radou et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Understanding the Folding-Function Tradeoff in Proteins
- (2013) Shachi Gosavi PLoS One
- Consequences of domain insertion on sequence-structure divergence in a superfold
- (2013) Chetanya Pandya et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Frustration in the energy landscapes of multidomain protein misfolding
- (2013) W. Zheng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Folding of multidomain proteins: Biophysical consequences of tethering even in apparently independent folding
- (2013) Oshrit Arviv et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- N-Terminal Domains in Two-Domain Proteins Are Biased to Be Shorter and Predicted to Fold Faster Than Their C-Terminal Counterparts
- (2013) Etai Jacob et al. Cell Reports
- Protein Conformational Switches: From Nature to Design
- (2012) Jeung-Hoi Ha et al. CHEMISTRY-A EUROPEAN JOURNAL
- Fast Subdomain Folding Prior to the Global Refolding Transition of E. coli Adenylate Kinase: A Double Kinetics Study
- (2012) Eldad Ben Ishay et al. JOURNAL OF MOLECULAR BIOLOGY
- Multidomain Protein Solves the Folding Problem by Multifunnel Combined Landscape: Theoretical Investigation of a Y-Family DNA Polymerase
- (2012) Yong Wang et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Modulation of a Pre-existing Conformational Equilibrium Tunes Adenylate Kinase Activity
- (2012) Jörgen Ådén et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Energy landscape and multiroute folding of topologically complex proteins adenylate kinase and 2ouf-knot
- (2012) W. Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cooperativity, Local-Nonlocal Coupling, and Nonnative Interactions: Principles of Protein Folding from Coarse-Grained Models
- (2011) Hue Sun Chan et al. Annual Review of Physical Chemistry
- Classification and Annotation of the Relationship between Protein Structural Change and Ligand Binding
- (2011) Takayuki Amemiya et al. JOURNAL OF MOLECULAR BIOLOGY
- Single-molecule fluorescence spectroscopy maps the folding landscape of a large protein
- (2011) Menahem Pirchi et al. Nature Communications
- Stability of domain structures in multi-domain proteins
- (2011) Ramachandra M. Bhaskara et al. Scientific Reports
- Many Local Motions Cooperate to Produce the Adenylate Kinase Conformational Transition
- (2010) Michael D. Daily et al. JOURNAL OF MOLECULAR BIOLOGY
- The folding cooperativity of a protein is controlled by its chain topology
- (2010) Elizabeth A. Shank et al. NATURE
- Overlap between folding and functional energy landscapes for adenylate kinase conformational change
- (2010) Ulrika Olsson et al. Nature Communications
- Noncooperative Folding of Subdomains in Adenylate Kinase†
- (2009) Louise Rundqvist et al. BIOCHEMISTRY
- Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins
- (2009) T. P. Schrank et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Computing protein stabilities from their chain lengths
- (2009) K. Ghosh et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
- (2008) Berk Hess et al. Journal of Chemical Theory and Computation
- Consequences of Domain Insertion on the Stability and Folding Mechanism of a Protein
- (2008) Gabriel Zoldák et al. JOURNAL OF MOLECULAR BIOLOGY
- Early Closure of a Long Loop in the Refolding of Adenylate Kinase: A Possible Key Role of Non-Local Interactions in the Initial Folding Steps
- (2008) Tomer Orevi et al. JOURNAL OF MOLECULAR BIOLOGY
- Cooperativity, connectivity, and folding pathways of multidomain proteins
- (2008) K. Itoh et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started