From Hub Proteins to Hub Modules: The Relationship Between Essentiality and Centrality in the Yeast Interactome at Different Scales of Organization

HINT: High-quality protein interactomes and their applications in understanding human disease

(2012) Jishnu Das et al.   BMC Systems Biology

A new essential protein discovery method based on the integration of protein-protein interaction and gene expression data

(2012) Min Li et al.   BMC Systems Biology

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

SPICi: a fast clustering algorithm for large biological networks

(2010) Peng Jiang et al.   BIOINFORMATICS

Quantitative analysis of fitness and genetic interactions in yeast on a genome scale

(2010) Anastasia Baryshnikova et al.   NATURE METHODS

Investigating the predictability of essential genes across distantly related organisms using an integrative approach

(2010) Jingyuan Deng et al.   NUCLEIC ACIDS RESEARCH

How and when should interactome-derived clusters be used to predict functional modules and protein function?

(2009) Jimin Song et al.   BIOINFORMATICS

Towards the prediction of essential genes by integration of network topology, cellular localization and biological process information

(2009) Marcio L Acencio et al.   BMC BIOINFORMATICS

A Complex-based Reconstruction of theSaccharomyces cerevisiaeInteractome

(2009) Haidong Wang et al.   MOLECULAR & CELLULAR PROTEOMICS

Predicting essential genes based on network and sequence analysis

(2009) Yih-Chii Hwang et al.   Molecular BioSystems

Up-to-date catalogues of yeast protein complexes

(2008) Shuye Pu et al.   NUCLEIC ACIDS RESEARCH

Organization of Physical Interactomes as Uncovered by Network Schemas

(2008) Eric Banks et al.   PLoS Computational Biology

Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality

(2008) Elena Zotenko et al.   PLoS Computational Biology