Biases in the Experimental Annotations of Protein Function and Their Effect on Our Understanding of Protein Function Space

STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation

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A large-scale evaluation of computational protein function prediction

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Toward the Single-Hour High-Quality Genome

(2012) Patrik L. Ståhl et al.   Annual Review of Biochemistry

Mining GO Annotations for Improving Annotation Consistency

(2012) Daniel Faria et al.   PLoS One

Protein function prediction: towards integration of similarity metrics

(2011) Serkan Erdin et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

The UniProt-GO Annotation database in 2011

(2011) E. C. Dimmer et al.   NUCLEIC ACIDS RESEARCH

The real cost of sequencing: higher than you think!

(2011) Andrea Sboner et al.   GENOME BIOLOGY

Biopython: freely available Python tools for computational molecular biology and bioinformatics

(2009) P. J. A. Cock et al.   BIOINFORMATICS

Protein function prediction – the power of multiplicity

(2009) Robert Rentzsch et al.   TRENDS IN BIOTECHNOLOGY

Semantic Similarity in Biomedical Ontologies

(2009) Catia Pesquita et al.   PLoS Computational Biology

Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies

(2009) Alexandra M. Schnoes et al.   PLoS Computational Biology

A Microtubule Interactome: Complexes with Roles in Cell Cycle and Mitosis

(2008) Julian R Hughes et al.   PLOS BIOLOGY