The Carbon Assimilation Network in Escherichia coli Is Densely Connected and Largely Sign-Determined by Directions of Metabolic Fluxes

Network-Free Inference of Knockout Effects in Yeast

(2010) Tal Peleg et al.   PLoS Computational Biology

Effect of cra gene knockout together with edd and iclR genes knockout on the metabolism in Escherichia coli

(2008) Dayanidhi Sarkar et al.   ARCHIVES OF MICROBIOLOGY

A feed-forward loop guarantees robust behavior in Escherichia coli carbohydrate uptake

(2008) A. Kremling et al.   BIOINFORMATICS

Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli

(2008) Markus W. Covert et al.   BIOINFORMATICS

Cyclic AMP-Dependent Catabolite Repression Is the Dominant Control Mechanism of Metabolic Fluxes under Glucose Limitation in Escherichia coli

(2008) A. Nanchen et al.   JOURNAL OF BACTERIOLOGY

Formulating genome-scale kinetic models in the post-genome era

(2008) Neema Jamshidi et al.   Molecular Systems Biology