A Threading-Based Method for the Prediction of DNA-Binding Proteins with Application to the Human Genome

Human genomic Z-DNA segments probed by the Zα domain of ADAR1

(2009) Heng Li et al.   NUCLEIC ACIDS RESEARCH

From Nonspecific DNA–Protein Encounter Complexes to the Prediction of DNA–Protein Interactions

(2009) Mu Gao et al.   PLoS Computational Biology

ConFunc—functional annotation in the twilight zone

(2008) Mark N. Wass et al.   BIOINFORMATICS

The Protein-Binding Potential of C2H2 Zinc Finger Domains

(2008) Kathryn J. Brayer et al.   CELL BIOCHEMISTRY AND BIOPHYSICS

Keep Your Fingers Off My DNA: Protein–Protein Interactions Mediated by C2H2 Zinc Finger Domains

(2008) Kathryn J. Brayer et al.   CELL BIOCHEMISTRY AND BIOPHYSICS

The complete genome of an individual by massively parallel DNA sequencing

(2008) David A. Wheeler et al.   NATURE

DBD-Hunter: a knowledge-based method for the prediction of DNA–protein interactions

(2008) Mu Gao et al.   NUCLEIC ACIDS RESEARCH

Regulation of innate immune responses by DAI (DLM-1/ZBP1) and other DNA-sensing molecules

(2008) Z. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-Molecule DNA Sequencing of a Viral Genome

(2008) T. D. Harris et al.   SCIENCE