Genome-Wide Stochastic Adaptive DNA Amplification at Direct and Inverted DNA Repeats in the Parasite Leishmania

Kinetoplastid-specific histone variant functions are conserved in Leishmania major

(2013) Britta A. Anderson et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Stress-induced mutation via DNA breaks inEscherichia coli: A molecular mechanism with implications for evolution and medicine

(2012) Susan M. Rosenberg et al.   BIOESSAYS

Glucosylated Hydroxymethyluracil, DNA Base J, Prevents Transcriptional Readthrough in Leishmania

(2012) Henri G.A.M. van Luenen et al.   CELL

Generation of Leishmania Hybrids by Whole Genomic DNA Transformation

(2012) Adriano C. Coelho et al.   PLoS Neglected Tropical Diseases

Ray Meta: scalable de novo metagenome assembly and profiling

(2012) Sébastien Boisvert et al.   GENOME BIOLOGY

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

(2011) M. B. Rogers et al.   GENOME RESEARCH

Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance

(2011) T. Downing et al.   GENOME RESEARCH

Intrachromosomal tandem duplication and repeat expansion during attempts to inactivate the subtelomeric essential gene GSH1 in Leishmania

(2011) Angana Mukherjee et al.   NUCLEIC ACIDS RESEARCH

FISH analysis reveals aneuploidy and continual generation of chromosomal mosaicism in Leishmania major

(2010) Yvon Sterkers et al.   CELLULAR MICROBIOLOGY

Gene Amplification and Adaptive Evolution in Bacteria

(2009) Dan I. Andersson et al.   Annual Review of Genetics

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Organization and evolution of two SIDER retroposon subfamilies and their impact on the Leishmania genome

(2009) Martin Smith et al.   BMC GENOMICS

Histone acetylations mark origins of polycistronic transcription in Leishmania major

(2009) Sean Thomas et al.   BMC GENOMICS

Nearby inverted repeats fuse to generate acentric and dicentric palindromic chromosomes by a replication template exchange mechanism

(2009) K. Mizuno et al.   GENES & DEVELOPMENT

Mechanisms of change in gene copy number

(2009) P. J. Hastings et al.   NATURE REVIEWS GENETICS

Gene expression modulation is associated with gene amplification, supernumerary chromosomes and chromosome loss in antimony-resistant Leishmania infantum

(2009) P. Leprohon et al.   NUCLEIC ACIDS RESEARCH

Modulation of gene expression in drug resistant Leishmania is associated with gene amplification, gene deletion and chromosome aneuploidy

(2008) Jean-Michel Ubeda et al.   GENOME BIOLOGY