标题
Genomics and outbreak investigation: from sequence to consequence
作者
关键词
Severe Acute Respiratory Syndrome, Severe Acute Respiratory Syndrome, Outbreak Investigation, Outbreak Strain, Epidemiological Typing
出版物
Genome Medicine
Volume 5, Issue 4, Pages -
出版商
Springer Nature
发表日期
2016-07-14
DOI
10.1186/gm440
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Drug-resistant tuberculosis
- (2013) Emanuele Pontali et al. CURRENT OPINION IN PULMONARY MEDICINE
- A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic
- (2013) M. T. G. Holden et al. GENOME RESEARCH
- Pathogen typing in the genomics era: MLST and the future of molecular epidemiology
- (2013) Marcos Pérez-Losada et al. INFECTION GENETICS AND EVOLUTION
- A Culture-Independent Sequence-Based Metagenomics Approach to the Investigation of an Outbreak of Shiga-Toxigenic Escherichia coli O104:H4
- (2013) Nicholas J. Loman et al. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Unfoldase-mediated protein translocation through an α-hemolysin nanopore
- (2013) Jeff Nivala et al. NATURE BIOTECHNOLOGY
- Analysis of whole genome sequences of 16 strains of rubella virus from the United States, 1961–2009
- (2013) Emily Abernathy et al. Virology Journal
- Stepping stones in DNA sequencing
- (2012) Henrik Stranneheim et al. Biotechnology Journal
- Outbreak of Shiga Toxin-Producing Escherichia coli O104:H4 Associated With Organic Fenugreek Sprouts, France, June 2011
- (2012) L. A. King et al. CLINICAL INFECTIOUS DISEASES
- Next-generation sequencing technology in clinical virology
- (2012) M.R. Capobianchi et al. CLINICAL MICROBIOLOGY AND INFECTION
- Recent advances in nanopore sequencing
- (2012) Raj D. Maitra et al. ELECTROPHORESIS
- The evolution of the Escherichia coli phylogeny
- (2012) Roy R. Chaudhuri et al. INFECTION GENETICS AND EVOLUTION
- Meticillin-resistant Staphylococcus aureus (MRSA): global epidemiology and harmonisation of typing methods
- (2012) Stefania Stefani et al. INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
- Resolution of a Meningococcal Disease Outbreak from Whole-Genome Sequence Data with Rapid Web-Based Analysis Methods
- (2012) K. A. Jolley et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study
- (2012) Timothy M Walker et al. LANCET INFECTIOUS DISEASES
- Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study
- (2012) Simon R Harris et al. LANCET INFECTIOUS DISEASES
- Performance comparison of benchtop high-throughput sequencing platforms
- (2012) Nicholas J Loman et al. NATURE BIOTECHNOLOGY
- Genome sequencing in clinical microbiology
- (2012) Jacqueline Z-M Chan et al. NATURE BIOTECHNOLOGY
- Emergence and global spread of epidemic healthcare-associated Clostridium difficile
- (2012) Miao He et al. NATURE GENETICS
- Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe
- (2012) Kathryn E Holt et al. NATURE GENETICS
- MRSA epidemic linked to a quickly spreading colonization and virulence determinant
- (2012) Min Li et al. NATURE MEDICINE
- Transforming clinical microbiology with bacterial genome sequencing
- (2012) Xavier Didelot et al. NATURE REVIEWS GENETICS
- Molecular phylogenetics: principles and practice
- (2012) Ziheng Yang et al. NATURE REVIEWS GENETICS
- High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity
- (2012) Nicholas J. Loman et al. NATURE REVIEWS MICROBIOLOGY
- In Vivo Capsular Switch in Streptococcus pneumoniae – Analysis by Whole Genome Sequencing
- (2012) Fen Z. Hu et al. PLoS One
- Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
- (2012) B. C. Young et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genomic Characterization of a Newly Discovered Coronavirus Associated with Acute Respiratory Distress Syndrome in Humans
- (2012) S. van Boheemen et al. mBio
- Whole Genome Sequencing Reveals Local Transmission Patterns of Mycobacterium bovis in Sympatric Cattle and Badger Populations
- (2012) Roman Biek et al. PLoS Pathogens
- Microevolutionary analysis of Clostridium difficile genomes to investigate transmission
- (2012) Xavier Didelot et al. GENOME BIOLOGY
- BIGSdb: Scalable analysis of bacterial genome variation at the population level
- (2011) Keith A Jolley et al. BMC BIOINFORMATICS
- Evidence for several waves of global transmission in the seventh cholera pandemic
- (2011) Ankur Mutreja et al. NATURE
- Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection
- (2011) Christopher B Ford et al. NATURE GENETICS
- Probable Zoonotic Leprosy in the Southern United States
- (2011) Richard W. Truman et al. NEW ENGLAND JOURNAL OF MEDICINE
- Open-Source Genomic Analysis of Shiga-Toxin–ProducingE. coliO104:H4
- (2011) Holger Rohde et al. NEW ENGLAND JOURNAL OF MEDICINE
- Epidemic Profile of Shiga-Toxin–ProducingEscherichia coliO104:H4 Outbreak in Germany
- (2011) Christina Frank et al. NEW ENGLAND JOURNAL OF MEDICINE
- German Outbreak ofEscherichia coliO104:H4 Associated with Sprouts
- (2011) Udo Buchholz et al. NEW ENGLAND JOURNAL OF MEDICINE
- Whole-Genome Sequencing and Social-Network Analysis of a Tuberculosis Outbreak
- (2011) Jennifer L. Gardy et al. NEW ENGLAND JOURNAL OF MEDICINE
- Rapid Pneumococcal Evolution in Response to Clinical Interventions
- (2011) N. J. Croucher et al. SCIENCE
- Population Genetics of Vibrio cholerae from Nepal in 2010: Evidence on the Origin of the Haitian Outbreak
- (2011) R. S. Hendriksen et al. mBio
- Are diagnostic and public health bacteriology ready to become branches of genomic medicine?
- (2011) Mark J Pallen et al. Genome Medicine
- Combined high-resolution genotyping and geospatial analysis reveals modes of endemic urban typhoid fever transmission
- (2011) S. Baker et al. Open Biology
- High-throughput sequencing and clinical microbiology: progress, opportunities and challenges
- (2010) Mark J Pallen et al. CURRENT OPINION IN MICROBIOLOGY
- Severe Acute Respiratory Syndrome (SARS)
- (2010) Dennis J. Cleri et al. INFECTIOUS DISEASE CLINICS OF NORTH AMERICA
- Issues in biosecurity and biosafety
- (2010) Brian D. Nordmann INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
- High-throughput whole-genome sequencing to dissect the epidemiology of Acinetobacter baumannii isolates from a hospital outbreak
- (2010) T. Lewis et al. JOURNAL OF HOSPITAL INFECTION
- Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity
- (2010) Giovanna Morelli et al. NATURE GENETICS
- Sequencing technologies — the next generation
- (2009) Michael L. Metzker NATURE REVIEWS GENETICS
- Generations of sequencing technologies
- (2008) Erik Pettersson et al. GENOMICS
- A New Arenavirus in a Cluster of Fatal Transplant-Associated Diseases
- (2008) Gustavo Palacios et al. NEW ENGLAND JOURNAL OF MEDICINE
- Newly Discovered Ebola Virus Associated with Hemorrhagic Fever Outbreak in Uganda
- (2008) Jonathan S. Towner et al. PLoS Pathogens
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search