Sequencing and analysis of the gastrula transcriptome of the brittle star Ophiocoma wendtii

A gene regulatory network controlling the embryonic specification of endoderm

(2011) Isabelle S. Peter et al.   NATURE

Activation of the skeletogenic gene regulatory network in the early sea urchin embryo

(2010) T. Sharma et al.   DEVELOPMENT

High accuracy, high-resolution prevalence measurement for the majority of locally expressed regulatory genes in early sea urchin development

(2010) Stefan C. Materna et al.   GENE EXPRESSION PATTERNS

Evolutionary Rates and Gene Dispensability Associate with Replication Timing in the Archaeon Sulfolobus islandicus

(2010) Kenneth M. Flynn et al.   Genome Biology and Evolution

Proteomic analysis of sea urchin (Strongylocentrotus purpuratus) spicule matrix

(2010) Karlheinz Mann et al.   Proteome Science

Why Genes Evolve Faster on Secondary Chromosomes in Bacteria

(2010) Vaughn S. Cooper et al.   PLoS Computational Biology

Gene regulatory networks for ectoderm specification in sea urchin embryos

(2009) Yi-Hsien Su   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

(2009) Eli Meyer et al.   BMC GENOMICS

Dynamics of Delta/Notch signaling on endomesoderm segregation in the sea urchin embryo

(2009) J. C. Croce et al.   DEVELOPMENT

Chordin is required for neural but not axial development in sea urchin embryos

(2009) Cynthia A. Bradham et al.   DEVELOPMENTAL BIOLOGY

A conserved gene regulatory network subcircuit drives different developmental fates in the vegetal pole of highly divergent echinoderm embryos

(2009) Brenna S. McCauley et al.   DEVELOPMENTAL BIOLOGY

The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage

(2009) Isabelle S. Peter et al.   DEVELOPMENTAL BIOLOGY

Evolutionary modification of T-brain (tbr) expression patterns in sand dollar

(2009) Keiko Minemura et al.   GENE EXPRESSION PATTERNS

Patterning of the Dorsal-Ventral Axis in Echinoderms: Insights into the Evolution of the BMP-Chordin Signaling Network

(2009) François Lapraz et al.   PLOS BIOLOGY

Lessons from a gene regulatory network: echinoderm skeletogenesis provides insights into evolution, plasticity and morphogenesis

(2008) C. A. Ettensohn   DEVELOPMENT

Lefty acts as an essential modulator of Nodal activity during sea urchin oral–aboral axis formation

(2008) Véronique Duboc et al.   DEVELOPMENTAL BIOLOGY

SpBase: the sea urchin genome database and web site

(2008) R. A. Cameron et al.   NUCLEIC ACIDS RESEARCH

Transfer of a large gene regulatory apparatus to a new developmental address in echinoid evolution

(2008) F. Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The sea urchin (Strongylocentrotus purpuratus) test and spine proteomes

(2008) Karlheinz Mann et al.   Proteome Science

A spatially dynamic cohort of regulatory genes in the endomesodermal gene network of the sea urchin embryo

(2007) Joel Smith et al.   DEVELOPMENTAL BIOLOGY