Toward richer metadata for microbial sequences: replacing strain-level NCBI taxonomy taxids with BioProject, BioSample and Assembly records

The International Nucleotide Sequence Database Collaboration

(2012) Y. Nakamura et al.   NUCLEIC ACIDS RESEARCH

ArrayExpress update—trends in database growth and links to data analysis tools

(2012) Gabriella Rustici et al.   NUCLEIC ACIDS RESEARCH

NCBI GEO: archive for functional genomics data sets—update

(2012) Tanya Barrett et al.   NUCLEIC ACIDS RESEARCH

Pathogen comparative genomics in the next-generation sequencing era: genome alignments, pangenomics and metagenomics

(2011) B. Hu et al.   Briefings in Functional Genomics

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

(2011) Pelin Yilmaz et al.   NATURE BIOTECHNOLOGY

The BioSample Database (BioSD) at the European Bioinformatics Institute

(2011) M. Gostev et al.   NUCLEIC ACIDS RESEARCH

The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments

(2011) Y. Kodama et al.   NUCLEIC ACIDS RESEARCH

BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata

(2011) T. Barrett et al.   NUCLEIC ACIDS RESEARCH

The NCBI Taxonomy database

(2011) S. Federhen   NUCLEIC ACIDS RESEARCH