Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling

Sediment microbial communities in Great Boiling Spring are controlled by temperature and distinct from water communities

(2012) Jessica K Cole et al.   ISME Journal

Korarchaeota Diversity, Biogeography, and Abundance in Yellowstone and Great Basin Hot Springs and Ecological Niche Modeling Based on Machine Learning

(2012) Robin L. Miller-Coleman et al.   PLoS One

Dissimilatory Reduction of Extracellular Electron Acceptors in Anaerobic Respiration

(2011) Katrin Richter et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Sequence of the hyperplastic genome of the naturally competent Thermus scotoductus SA-01

(2011) Kamini Gounder et al.   BMC GENOMICS

Ammonia oxidation, denitrification and dissimilatory nitrate reduction to ammonium in two US Great Basin hot springs with abundant ammonia-oxidizing archaea

(2011) Jeremy A. Dodsworth et al.   ENVIRONMENTAL MICROBIOLOGY

Potential role of Thermus thermophilus and T. oshimai in high rates of nitrous oxide (N2O) production in ∼80 °C hot springs in the US Great Basin

(2011) B. P. HEDLUND et al.   Geobiology

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

(2011) I. Pagani et al.   NUCLEIC ACIDS RESEARCH

iPath2.0: interactive pathway explorer

(2011) Takuji Yamada et al.   NUCLEIC ACIDS RESEARCH

Interdomain Conjugal Transfer of DNA from Bacteria to Archaea

(2010) J. A. Dodsworth et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Moderately Thermophilic Magnetotactic Bacteria from Hot Springs in Nevada

(2010) C. T. Lefevre et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

(2010) Amrita Pati et al.   NATURE METHODS

IMG ER: a system for microbial genome annotation expert review and curation

(2009) Victor M. Markowitz et al.   BIOINFORMATICS

Microbiology and geochemistry of great boiling and mud hot springs in the United States Great Basin

(2009) Kyle C. Costa et al.   EXTREMOPHILES

Global Occurrence of Archaeal amoA Genes in Terrestrial Hot Springs

(2008) C. L. Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A single channel for nitrate uptake, nitrite export and nitrite uptake byEscherichia coliNarU and a role for NirC in nitrite export and uptake

(2008) Wenjing Jia et al.   BIOCHEMICAL JOURNAL

The role of the nitrate respiration element of Thermus thermophilus in the control and activity of the denitrification apparatus

(2008) Felipe Cava et al.   ENVIRONMENTAL MICROBIOLOGY

The role of single subunits of the DNA transport machinery ofThermus thermophilusHB27 in DNA binding and transport

(2008) Cornelia Schwarzenlander et al.   ENVIRONMENTAL MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

The minimum information about a genome sequence (MIGS) specification

(2008) Dawn Field et al.   NATURE BIOTECHNOLOGY

Molecular mechanism of energy conservation in polysulfide respiration

(2008) Mika Jormakka et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

A simple, fast, and accurate method of phylogenomic inference

(2008) Martin Wu et al.   GENOME BIOLOGY