4.7 Article

Perivascular Spaces Segmentation in Brain MRI Using Optimal 3D Filtering

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SCIENTIFIC REPORTS
卷 8, 期 -, 页码 -

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NATURE PUBLISHING GROUP
DOI: 10.1038/s41598-018-19781-5

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资金

  1. Scottish Imaging Network: A Platform for Scientific Excellence (SINAPSE)
  2. Fondation Leducq Transatlantic Networks of Excellence program [16 CVD 05]
  3. European Union [PHC-03-15, 666881]
  4. MRC Disconnected Mind [MR/M013111/1]
  5. Wellcome Trust
  6. Row Fogo Charitable Trust [BRO-D.FID3668413]
  7. Fondation Leducq
  8. Canadian Institutes of Health Research [125740, 13129]
  9. Heart & Stroke Foundation Canadian Partnership for Stroke Recovery
  10. Hurvitz Brain Sciences Research program at Sunnybrook Research Institute
  11. Linda C. Campbell Foundation
  12. Canadian Vascular Network
  13. Ontario Brain Institute's Ontario Neurodegenerative Disease Research Initiative
  14. Sunnybrook Research Institute, Sunnybrook Health Sciences Centre, Dept. of Medicine
  15. Brill Chair Neurology, SHSC
  16. Dept. of Medicine, University of Toronto
  17. Engineering and Physical Sciences Research Council [EP/M005976/1] Funding Source: researchfish
  18. Medical Research Council [MR/K026992/1, UKDRI-4002, MR/J006971/1, MR/M013111/1] Funding Source: researchfish
  19. EPSRC [EP/M005976/1] Funding Source: UKRI
  20. MRC [UKDRI-4002, MR/M013111/1, MR/J006971/1] Funding Source: UKRI

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Perivascular Spaces (PVS) are a feature of Small Vessel Disease (SVD), and are an important part of the brain's circulation and glymphatic drainage system. Quantitative analysis of PVS on Magnetic Resonance Images (MRI) is important for understanding their relationship with neurological diseases. In this work, we propose a segmentation technique based on the 3D Frangi filtering for extraction of PVS from MRI. We used ordered logit models and visual rating scales as alternative ground truth for Frangi filter parameter optimization and evaluation. We optimized and validated our proposed models on two independent cohorts, a dementia sample (N = 20) and patients who previously had mild to moderate stroke (N = 48). Results demonstrate the robustness and generalisability of our segmentation method. Segmentation-based PVS burden estimates correlated well with neuroradiological assessments (Spearman's. = 0.74, p < 0.001), supporting the potential of our proposed method.

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