Mitogenomes from type specimens, a genotyping tool for morphologically simple species: ten genomes of agar-producing red algae

A novel phylogeny of the Gelidiales (Rhodophyta) based on five genes including the nuclear Ces A, with descriptions of Orthogonacladia gen. nov. and Orthogonacladiaceae fam. nov.

(2016) Ga Hun Boo et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Taxonomic reappraisal ofGelidium coarctatum(Gelidiales, Rhodophyta) andGelidium lineare sp. nov. from the tropical western Atlantic

(2016) Cíntia Iha et al.   PHYCOLOGIA

Phylogeny and distribution of the genusPikea(Gigartinales, Rhodophyta) with special reference toP. yoshizakiifrom Korea

(2016) Ga Hun Boo et al.   PHYCOLOGIA

Complete mitochondrial genome, genetic diversity and molecular phylogeny ofGracilaria salicornia(Rhodophyta: Gracilariaceae)

(2016) Sze-Looi Song et al.   PHYCOLOGIA

Highly Conserved Mitochondrial Genomes among Multicellular Red Algae of the Florideophyceae

(2015) Eun Chan Yang et al.   Genome Biology and Evolution

Genetic segregation and differentiation of a common subtidal alga Pterocladia lucida (Gelidiales, Rhodophyta) between Australia and New Zealand

(2015) Ga Hun Boo et al.   JOURNAL OF APPLIED PHYCOLOGY

Lab staple agar hit by seaweed shortage

(2015) Ewen Callaway   NATURE

Unique repeat and plasmid sequences in the mitochondrial genome ofGracilaria chilensis(Gracilariales, Rhodophyta)

(2015) Jun-Mo Lee et al.   PHYCOLOGIA

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Misleading morphologies and the importance of sequencing type specimens for resolving coralline taxonomy (Corallinales, Rhodophyta):Pachyarthron cretaceumisCorallina officinalis

(2014) Katharine R. Hind et al.   JOURNAL OF PHYCOLOGY

Studies of Costa Rican Gelidiales (Florideophyceae). II. Two Pacific Taxa Including Gelidium microglossum, n. sp.1

(2014) Amanda L. Grusz et al.   PACIFIC SCIENCE

Gelidiophycus (Rhodophyta: Gelidiales): A new genus of marine algae from East Asia

(2014) Ga Hun Boo et al.   TAXON

Minimally destructive sampling of type specimens of Pyropia (Bangiales, Rhodophyta) recovers complete plastid and mitochondrial genomes

(2014) Jeffery R. Hughey et al.   Scientific Reports

Flexible and Transparent Dielectric Film with a High Dielectric Constant Using Chemical Vapor Deposition-Grown Graphene Interlayer

(2013) Jin-Young Kim et al.   ACS Nano

20 years since the introduction of DNA barcoding: from theory to application

(2013) Živa Fišer Pečnikar et al.   JOURNAL OF APPLIED GENETICS

Taxonomy and distribution of selected species of the agarophyte genus Gelidium (Gelidiales, Rhodophyta)

(2013) Ga Hun Boo et al.   JOURNAL OF APPLIED PHYCOLOGY

Complete mitochondrial genome of a rhodolith,Sporolithon durum(Sporolithales, Rhodophyta)

(2013) Kyeong Mi Kim et al.   Mitochondrial DNA

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

(2013) Marc Lohse et al.   NUCLEIC ACIDS RESEARCH

Transfer of the red algaGelidium zollingeriSonder (Gelidiales) toYonagunia(Halymeniales) based on morphological and molecular evidence

(2013) Ga Hun Boo et al.   PHYCOLOGIA

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Acquiring DNA sequence data from dried archival red algae (Florideophyceae) for the purpose of applying available names to contemporary genetic species: a critical assessment

(2012) Gary W. Saunders et al.   Botany

Comment on “Acquiring DNA sequence data from dried archival red algae (Florideophyceae) for the purpose of applying available names to contemporary genetic species: a critical assessment” 1Appears in Botany 90(3): 191–203. doi:10.1139/b11-079.

(2012) Jeffery R. Hughey et al.   Botany

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS

A NEW AGAROPHYTE SPECIES, GELIDIUM EUCORNEUM SP. NOV. (GELIDIALES, RHODOPHYTA), BASED ON MOLECULAR AND MORPHOLOGICAL DATA1

(2011) Kyeong Mi Kim et al.   JOURNAL OF PHYCOLOGY

New, resurrected and redefined species of Mastocarpus (Phyllophoraceae, Rhodophyta) from the northeast Pacific

(2011) Sandra C Lindstrom et al.   PHYCOLOGIA

Morphometric and molecular analyses confirm two distinct species of Calliarthron (Corallinales, Rhodophyta), a genus endemic to the northeast Pacific

(2011) Paul W. Gabrielson et al.   PHYCOLOGIA

DNA Damage in Plant Herbarium Tissue

(2011) Martijn Staats et al.   PLoS One

Two-gene sequences and morphology of Gelidium zollingeri (Kutzing) comb. nov. (Gelidiales, Rhodophyta)

(2011) Kyeong-Mi Kim et al.   ALGAE

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Herbaria are a major frontier for species discovery

(2010) D. P. Bebber et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH