Comparative transcriptomic analysis uncovers the complex genetic network for resistance to Sclerotinia sclerotiorum in Brassica napus

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Identification and functional analysis of mitogen-activated protein kinase kinase kinase (MAPKKK) genes in canola (Brassica napus L.)

(2014) Yun Sun et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression ofBnWRKY33in oilseed rape enhances resistance toSclerotinia sclerotiorum

(2014) Zheng Wang et al.   MOLECULAR PLANT PATHOLOGY

A maize wall-associated kinase confers quantitative resistance to head smut

(2014) Weiliang Zuo et al.   NATURE GENETICS

Plant hormones in defense response of Brassica napus to Sclerotinia sclerotiorum – Reassessing the role of salicylic acid in the interaction with a necrotroph

(2014) Miroslava Nováková et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

A Complex Recombination Pattern in the Genome of Allotetraploid Brassica napus as Revealed by a High-Density Genetic Map

(2014) Guangqin Cai et al.   PLoS One

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

(2014) B. Chalhoub et al.   SCIENCE

Genome Wide Association Mapping of Resistance in Soybean with a Genotyping-by-Sequencing Approach

(2014) Maxime Bastien et al.   Plant Genome

Identification and analysis of MKK and MPK gene families in canola (Brassica napus L.)

(2013) Wanwan Liang et al.   BMC GENOMICS

Comparative genotype reactions to Sclerotinia sclerotiorum within breeding populations of Brassica napus and B. juncea from India and China

(2013) M. J. Barbetti et al.   EUPHYTICA

Overexpression of AtWRKY28 and AtWRKY75 in Arabidopsis enhances resistance to oxalic acid and Sclerotinia sclerotiorum

(2013) Xiaoting Chen et al.   PLANT CELL REPORTS

Downregulation of multiple CDK inhibitorICK/KRPgenes upregulates the E2F pathway and increases cell proliferation, and organ and seed sizes in Arabidopsis

(2013) Yan Cheng et al.   PLANT JOURNAL

Identification of QTLs for Resistance to Sclerotinia Stem Rot and BnaC.IGMT5.a as a Candidate Gene of the Major Resistant QTL SRC6 in Brassica napus

(2013) Jian Wu et al.   PLoS One

Plant Immunity to Necrotrophs

(2012) Tesfaye Mengiste   Annual Review of Phytopathology

Brassica napus polygalacturonase inhibitor proteins inhibit Sclerotinia sclerotiorum polygalacturonase enzymatic and necrotizing activities and delay symptoms in transgenic plants

(2012) Zafer Dallal Bashi et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Monolignol biosynthesis is associated with resistance to Sclerotinia sclerotiorum in Camelina sativa

(2012) CHRISTINA EYNCK et al.   MOLECULAR PLANT PATHOLOGY

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

Hormonal Modulation of Plant Immunity

(2011) Corné M.J. Pieterse et al.   Annual Review of Cell and Developmental Biology

RNA-Seq Analysis of a Soybean Near-Isogenic Line Carrying Bacterial Leaf Pustule-Resistant and -Susceptible Alleles

(2011) K. H. Kim et al.   DNA RESEARCH

Characterization of metabolite quantitative trait loci and metabolic networks that control glucosinolate concentration in the seeds and leaves of Brassica napus

(2011) Ji Feng et al.   NEW PHYTOLOGIST

Role of camalexin, indole glucosinolates, and side chain modification of glucosinolate-derived isothiocyanates in defense of Arabidopsis against Sclerotinia sclerotiorum

(2011) Henrik U. Stotz et al.   PLANT JOURNAL

Defense to Sclerotinia sclerotiorum in oilseed rape is associated with the sequential activations of salicylic acid signaling and jasmonic acid signaling

(2011) Zheng Wang et al.   PLANT SCIENCE

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea

(2011) Joelle Amselem et al.   PLoS Genetics

Nitric Oxide Participates in the Complex Interplay of Defense-Related Signaling Pathways Controlling Disease Resistance toSclerotinia sclerotioruminArabidopsis thaliana

(2010) Laure Perchepied et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Plant immunity: towards an integrated view of plant–pathogen interactions

(2010) Peter N. Dodds et al.   NATURE REVIEWS GENETICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Identification and expression analysis of WRKY transcription factor genes in canola (Brassica napus L.) in response to fungal pathogens and hormone treatments

(2009) Bo Yang et al.   BMC PLANT BIOLOGY

Patterns of differential gene expression inBrassica napuscultivars infected withSclerotinia sclerotiorum

(2009) JIANWEI ZHAO et al.   MOLECULAR PLANT PATHOLOGY

Overexpression of Brassica napus MPK4 Enhances Resistance to Sclerotinia sclerotiorum in Oilseed Rape

(2009) Zheng Wang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Characterization of Defense Signaling Pathways of Brassica napus and Brassica carinata in Response to Sclerotinia sclerotiorum Challenge

(2009) Bo Yang et al.   PLANT MOLECULAR BIOLOGY REPORTER

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

RLM3, a TIR domain encoding gene involved in broad-range immunity of Arabidopsis to necrotrophic fungal pathogens

(2008) Jens Staal et al.   PLANT JOURNAL

Role of plant hormones in plant defence responses

(2008) Rajendra Bari et al.   PLANT MOLECULAR BIOLOGY