Comparative genomics of the Hedgehog loci in chordates and the origins of Shh regulatory novelties

(Re)inventing the Circadian Feedback Loop

(2012) Steven A. Brown et al.   DEVELOPMENTAL CELL

An ancient genomic regulatory block conserved across bilaterians and its dismantling in tetrapods by retrogene replacement

(2012) I. Maeso et al.   GENOME RESEARCH

Ancient deuterostome origins of vertebrate brain signalling centres

(2012) Ariel M. Pani et al.   NATURE

Contrasting 5' and 3' Evolutionary Histories and Frequent Evolutionary Convergence in Meis/hth Gene Structures

(2011) Manuel Irimia et al.   Genome Biology and Evolution

Using the Acropora digitifera genome to understand coral responses to environmental change

(2011) Chuya Shinzato et al.   NATURE

Transphyletic conservation of developmental regulatory state in animal evolution

(2011) J. L. Royo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Copy-Number Variations Involving the IHH Locus Are Associated with Syndactyly and Craniosynostosis

(2010) Eva Klopocki et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Cis-regulatory characterization of sequence conservation surrounding the Hox4 genes

(2010) Beena Punnamoottil et al.   DEVELOPMENTAL BIOLOGY

Midline Signaling and Evolution of the Forebrain in Chordates: A Focus on the Lamprey Hedgehog Case

(2010) Sylvie Rétaux et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Two Lamprey Hedgehog Genes Share Non-Coding Regulatory Sequences and Expression Patterns with Gnathostome Hedgehogs

(2010) Shungo Kano et al.   PLoS One

Conserved developmental expression of Fezf in chordates and Drosophila and the origin of the Zona Limitans Intrathalamica (ZLI) brain organizer

(2010) Manuel Irimia et al.   EvoDevo

Conservation of shh cis-regulatory architecture of the coelacanth is consistent with its ancestral phylogenetic position

(2010) Michael Lang et al.   EvoDevo

A cluster of three long-range enhancers directs regional Shh expression in the epithelial linings

(2009) T. Sagai et al.   DEVELOPMENT

Hedgehog signaling patterns mesoderm in the sea urchin

(2009) Katherine D. Walton et al.   DEVELOPMENTAL BIOLOGY

Zebrafish enhancer detection (ZED) vector: A new tool to facilitate transgenesis and the functional analysis ofcis-regulatory regions in zebrafish

(2009) José Bessa et al.   DEVELOPMENTAL DYNAMICS

Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention

(2009) A. L. Hufton et al.   GENOME RESEARCH

Planarian Hh Signaling Regulates Regeneration Polarity and Links Hh Pathway Evolution to Cilia

(2009) J. C. Rink et al.   SCIENCE

Unexpectedly large number of conserved noncoding regions within the ancestral chordate Hox cluster

(2008) Juan Pascual-Anaya et al.   DEVELOPMENT GENES AND EVOLUTION

Hedgehog: functions and mechanisms

(2008) M. Varjosalo et al.   GENES & DEVELOPMENT

The amphioxus genome illuminates vertebrate origins and cephalochordate biology

(2008) L. Z. Holland et al.   GENOME RESEARCH

Gene Expansion and Retention Leads to a Diverse Tyrosine Kinase Superfamily in Amphioxus

(2008) S. D'Aniello et al.   MOLECULAR BIOLOGY AND EVOLUTION

The amphioxus genome and the evolution of the chordate karyotype

(2008) Nicholas H. Putnam et al.   NATURE

The Hedgehog gene family of the cnidarian, Nematostella vectensis, and implications for understanding metazoan Hedgehog pathway evolution

(2007) David Q. Matus et al.   DEVELOPMENTAL BIOLOGY