Identification of links between small molecules and miRNAs in human cancers based on transcriptional responses

Integrative Analysis of Many Weighted Co-Expression Networks Using Tensor Computation

(2014) Wenyuan Li et al.   PLoS Computational Biology

miREnvironment Database: providing a bridge for microRNAs, environmental factors and phenotypes

(2011) Qingqing Yang et al.   BIOINFORMATICS

Identification of microRNA-mRNA modules using microarray data

(2011) Vivek Jayaswal et al.   BMC GENOMICS

Integrative network analysis identifies key genes and pathways in the progression of hepatitis C virus induced hepatocellular carcinoma

(2011) Siyuan Zheng et al.   BMC Medical Genomics

Autophagy as a therapeutic target in cancer

(2011) Ning Chen et al.   CANCER BIOLOGY & THERAPY

MiR-129-5p is required for histone deacetylase inhibitor-induced cell death in thyroid cancer cells

(2011) Patrick Brest et al.   ENDOCRINE-RELATED CANCER

Inferring modules from human protein interactome classes

(2010) Elisabetta Marras et al.   BMC Systems Biology

Targeting MicroRNAs With Small Molecules: From Dream to Reality

(2010) S Zhang et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

Enhancing cytotoxic and apoptotic effect in OVCAR-3 and MDAH-2774 cells with all-trans retinoic acid and zoledronic acid: a paradigm of synergistic molecular targeting treatment for ovarian cancer

(2010) Bulent Karabulut et al.   JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH

Discovery of drug mode of action and drug repositioning from transcriptional responses

(2010) F. Iorio et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prospects of RNAi and microRNA-based therapies for hepatitis C

(2009) Qiuwei Pan et al.   EXPERT OPINION ON BIOLOGICAL THERAPY

Estrogen treatment following severe burn injury reduces brain inflammation and apoptotic signaling

(2009) Joshua W Gatson et al.   Journal of Neuroinflammation

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

SubpathwayMiner: a software package for flexible identification of pathways

(2009) C. Li et al.   NUCLEIC ACIDS RESEARCH

PubChem: a public information system for analyzing bioactivities of small molecules

(2009) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

Identifying genotype-dependent efficacy of single and combined PI3K- and MAPK-pathway inhibition in cancer

(2009) M. L. Sos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Therapeutic Silencing of MicroRNA-122 in Primates with Chronic Hepatitis C Virus Infection

(2009) R. E. Lanford et al.   SCIENCE

Small Molecule Subgraph Detector (SMSD) toolkit

(2009) Syed Rahman et al.   Journal of Cheminformatics

Small-Molecule Inhibitors of MicroRNA miR-21 Function

(2008) Kiranmai Gumireddy et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

MicroRNA Expression Profiling in Human Ovarian Cancer: miR-214 Induces Cell Survival and Cisplatin Resistance by Targeting PTEN

(2008) H. Yang et al.   CANCER RESEARCH

MicroRNAs modulate the chemosensitivity of tumor cells

(2008) P. E. Blower et al.   MOLECULAR CANCER THERAPEUTICS

Gene expression module-based chemical function similarity search

(2008) Y. Li et al.   NUCLEIC ACIDS RESEARCH

Drug Target Identification Using Side-Effect Similarity

(2008) M. Campillos et al.   SCIENCE