Modeling thermophoretic effects in solid-state nanopores

Note: Local thermal conductivities from boundary driven non-equilibrium molecular dynamics simulations

(2014) F. Bresme et al.   JOURNAL OF CHEMICAL PHYSICS

A Coarse-Grained Model of Unstructured Single-Stranded DNA Derived from Atomistic Simulation and Single-Molecule Experiment

(2014) Christopher Maffeo et al.   Journal of Chemical Theory and Computation

Filtering of Nanoparticles with Tunable Semiconductor Membranes

(2013) Anna Nadtochiy et al.   ACS Nano

Stretching and Controlled Motion of Single-Stranded DNA in Locally Heated Solid-State Nanopores

(2013) Maxim Belkin et al.   ACS Nano

Water polarization induced by thermal gradients: The extended simple point charge model (SPC/E)

(2013) J. A. Armstrong et al.   JOURNAL OF CHEMICAL PHYSICS

Alkali Halide Solutions under Thermal Gradients: Soret Coefficients and Heat Transfer Mechanisms

(2013) Frank Römer et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Temperature Sculpting in Yoctoliter Volumes

(2013) Joseph E. Reiner et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Plasmonic Nanopore for Electrical Profiling of Optical Intensity Landscapes

(2013) Magnus P. Jonsson et al.   NANO LETTERS

Thermophoretic Manipulation of DNA Translocation through Nanopores

(2012) Yuhui He et al.   ACS Nano

Modeling and simulation of nanoparticle separation through a solid-state nanopore

(2012) Talukder Z. Jubery et al.   ELECTROPHORESIS

Heat conduction and thermomolecular orientation in diatomic fluids: a non-equilibrium molecular dynamics study

(2012) Frank Römer et al.   MOLECULAR SIMULATION

Thermally controlled permeation of ionic molecules through synthetic nanopores functionalized with amine-terminated polymer brushes

(2012) Saima Nasir et al.   NANOTECHNOLOGY

Stacked Graphene-Al2O3 Nanopore Sensors for Sensitive Detection of DNA and DNA–Protein Complexes

(2011) Bala Murali Venkatesan et al.   ACS Nano

Optimization of the CHARMM Additive Force Field for DNA: Improved Treatment of the BI/BII Conformational Equilibrium

(2011) Katarina Hart et al.   Journal of Chemical Theory and Computation

Improved Parametrization of Li+, Na+, K+, and Mg2+ Ions for All-Atom Molecular Dynamics Simulations of Nucleic Acid Systems

(2011) Jejoong Yoo et al.   Journal of Physical Chemistry Letters

Controlling molecular transport through nanopores

(2011) U. F. Keyser   Journal of the Royal Society Interface

Current Rectification in Temperature-Responsive Single Nanopores

(2010) Wei Guo et al.   CHEMPHYSCHEM

Nanopore Sequencing: Electrical Measurements of the Code of Life

(2010) Winston Timp et al.   IEEE TRANSACTIONS ON NANOTECHNOLOGY

Electrically Facilitated Translocations of Proteins through Silicon Nitride Nanopores: Conjoint and Competitive Action of Diffusion, Electrophoresis, and Electroosmosis

(2010) Matthias Firnkes et al.   NANO LETTERS

Microscopic Mechanics of Hairpin DNA Translocation through Synthetic Nanopores

(2009) Jeffrey Comer et al.   BIOPHYSICAL JOURNAL

Nanopore analytics: sensing of single molecules

(2009) Stefan Howorka et al.   CHEMICAL SOCIETY REVIEWS

Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient

(2009) Meni Wanunu et al.   Nature Nanotechnology

3D-DART: a DNA structure modelling server

(2009) M. van Dijk et al.   NUCLEIC ACIDS RESEARCH

Heat transfer from nanoparticles: A corresponding state analysis

(2009) S. Merabia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ionic Transport Through Single Solid-State Nanopores Controlled with Thermally Nanoactuated Macromolecular Gates

(2009) Basit Yameen et al.   Small

Nanoscopic Porous Sensors

(2008) John J. Kasianowicz et al.   Annual Review of Analytical Chemistry

Determination of Alkali and Halide Monovalent Ion Parameters for Use in Explicitly Solvated Biomolecular Simulations

(2008) In Suk Joung et al.   JOURNAL OF PHYSICAL CHEMISTRY B

The potential and challenges of nanopore sequencing

(2008) Daniel Branton et al.   NATURE BIOTECHNOLOGY

Electro-osmotic screening of the DNA charge in a nanopore

(2008) Binquan Luan et al.   PHYSICAL REVIEW E