A global non-coding RNA system modulates fission yeast protein levels in response to stress

Control of Cdc28 CDK1 by a Stress-Induced lncRNA

(2014) Mariona Nadal-Ribelles et al.   MOLECULAR CELL

Role of the fission yeast cell integrity MAPK pathway in response to glucose limitation

(2013) Marisa Madrid et al.   BMC MICROBIOLOGY

Long Noncoding RNAs: Past, Present, and Future

(2013) J. T. Y. Kung et al.   GENETICS

Extensive transcriptional heterogeneity revealed by isoform profiling

(2013) Vicent Pelechano et al.   NATURE

RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts

(2013) Sarah Geisler et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Genome-wide mapping of polyadenylation sites in fission yeast reveals widespread alternative polyadenylation

(2013) Juan Mata   RNA Biology

Mmi1 RNA surveillance machinery directs RNAi complex RITS to specific meiotic genes in fission yeast

(2012) Edwige Hiriart et al.   EMBO JOURNAL

RNAi keeps Atf1-bound stress response genes in check at nuclear pores

(2012) K. J. Woolcock et al.   GENES & DEVELOPMENT

Repression of Meiotic Genes by Antisense Transcription and by Fkh2 Transcription Factor in Schizosaccharomyces pombe

(2012) Huei-Mei Chen et al.   PLoS One

Regulation of transcriptome, translation, and proteome in response to environmental stress in fission yeast

(2012) Daniel H Lackner et al.   GENOME BIOLOGY

SHRiMP2: Sensitive yet Practical Short Read Mapping

(2011) Matei David et al.   BIOINFORMATICS

Common ground: small RNA programming and chromatin modifications

(2011) Erwan Lejeune et al.   CURRENT OPINION IN CELL BIOLOGY

Programmed fluctuations in sense/antisense transcript ratios drive sexual differentiation in S. pombe

(2011) D. A. Bitton et al.   Molecular Systems Biology

A dynamic model of proteome changes reveals new roles for transcript alteration in yeast

(2011) M. V. Lee et al.   Molecular Systems Biology

Antisense expression increases gene expression variability and locus interdependency

(2011) Z. Xu et al.   Molecular Systems Biology

PomBase: a comprehensive online resource for fission yeast

(2011) V. Wood et al.   NUCLEIC ACIDS RESEARCH

RNA Elimination Machinery Targeting Meiotic mRNAs Promotes Facultative Heterochromatin Formation

(2011) M. Zofall et al.   SCIENCE

Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe

(2010) Katrina J Woolcock et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

An Integrated Mass-Spectrometry Pipeline Identifies Novel Protein Coding-Regions in the Human Genome

(2010) Danny A. Bitton et al.   PLoS One

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Stress-Induced Phosphorylation of S. pombe Atf1 Abrogates Its Interaction with F Box Protein Fbh1

(2009) Clare L. Lawrence et al.   CURRENT BIOLOGY

Stress-activated Genomic Expression Changes Serve a Preparative Role for Impending Stress in Yeast

(2008) David B. Berry et al.   MOLECULAR BIOLOGY OF THE CELL

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

(2008) Brian T. Wilhelm et al.   NATURE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry

(2008) Judit Villén et al.   Nature Protocols

Multiple Pathways Differentially Regulate Global Oxidative Stress Responses in Fission Yeast

(2007) Dongrong Chen et al.   MOLECULAR BIOLOGY OF THE CELL