标题
The epigenome in pluripotency and differentiation
作者
关键词
-
出版物
Epigenomics
Volume 6, Issue 1, Pages 121-137
出版商
Future Medicine Ltd
发表日期
2014-02-28
DOI
10.2217/epi.13.80
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- X Chromosome Inactivation and Epigenetic Responses to Cellular Reprogramming
- (2013) Derek Lessing et al. Annual Review of Genomics and Human Genetics
- Transcriptional and Epigenetic Dynamics during Specification of Human Embryonic Stem Cells
- (2013) Casey A. Gifford et al. CELL
- X-Inactivation, Imprinting, and Long Noncoding RNAs in Health and Disease
- (2013) Jeannie T. Lee et al. CELL
- Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes
- (2013) Warren A. Whyte et al. CELL
- Interplay between the Cancer Genome and Epigenome
- (2013) Hui Shen et al. CELL
- Mapping Human Epigenomes
- (2013) Chloe M. Rivera et al. CELL
- Epigenetics of Reprogramming to Induced Pluripotency
- (2013) Bernadett Papp et al. CELL
- Epigenomic Analysis of Multilineage Differentiation of Human Embryonic Stem Cells
- (2013) Wei Xie et al. CELL
- Human Embryonic Stem Cells Derived by Somatic Cell Nuclear Transfer
- (2013) Masahito Tachibana et al. CELL
- Tight correlation of 5-hydroxymethylcytosine and Polycomb marks in health and disease
- (2013) Michael Haffner et al. CELL CYCLE
- Dynamic Chromatin Remodeling Mediated by Polycomb Proteins Orchestrates Pancreatic Differentiation of Human Embryonic Stem Cells
- (2013) Ruiyu Xie et al. Cell Stem Cell
- Epigenetic and genetic alterations of the imprinting disorder Beckwith–Wiedemann syndrome and related disorders
- (2013) Hidenobu Soejima et al. JOURNAL OF HUMAN GENETICS
- AID stabilizes stem-cell phenotype by removing epigenetic memory of pluripotency genes
- (2013) Ritu Kumar et al. NATURE
- XACT, a long noncoding transcript coating the active X chromosome in human pluripotent cells
- (2013) Céline Vallot et al. NATURE GENETICS
- DNA methylation: roles in mammalian development
- (2013) Zachary D. Smith et al. NATURE REVIEWS GENETICS
- DNA methylation dynamics in health and disease
- (2013) Yehudit Bergman et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Coordinate Regulation of DNA Methylation and H3K27me3 in Mouse Embryonic Stem Cells
- (2013) James A. Hagarman et al. PLoS One
- Global Epigenomic Reconfiguration During Mammalian Brain Development
- (2013) R. Lister et al. SCIENCE
- Identification of Novel Imprinted Differentially Methylated Regions by Global Analysis of Human-Parthenogenetic-Induced Pluripotent Stem Cells
- (2013) Yonatan Stelzer et al. Stem Cell Reports
- Base-Resolution Analysis of 5-Hydroxymethylcytosine in the Mammalian Genome
- (2012) Miao Yu et al. CELL
- Facilitators and Impediments of the Pluripotency Reprogramming Factors' Initial Engagement with the Genome
- (2012) Abdenour Soufi et al. CELL
- Site-Specific Silencing of Regulatory Elements as a Mechanism of X Inactivation
- (2012) J. Mauro Calabrese et al. CELL
- A Molecular Roadmap of Reprogramming Somatic Cells into iPS Cells
- (2012) Jose M. Polo et al. CELL
- Derivation Conditions Impact X-Inactivation Status in Female Human Induced Pluripotent Stem Cells
- (2012) Kiichiro Tomoda et al. Cell Stem Cell
- Molecular Signatures of Human Induced Pluripotent Stem Cells Highlight Sex Differences and Cancer Genes
- (2012) Montserrat C. Anguera et al. Cell Stem Cell
- Recurrent Variations in DNA Methylation in Human Pluripotent Stem Cells and Their Differentiated Derivatives
- (2012) Kristopher L. Nazor et al. Cell Stem Cell
- Erosion of Dosage Compensation Impacts Human iPSC Disease Modeling
- (2012) Shila Mekhoubad et al. Cell Stem Cell
- X-chromosome inactivation in monkey embryos and pluripotent stem cells
- (2012) Masahito Tachibana et al. DEVELOPMENTAL BIOLOGY
- The landscape for epigenetic/epigenomic biomedical resources
- (2012) Kabita Shakya et al. Epigenetics
- Prader-Willi syndrome
- (2012) Suzanne B. Cassidy et al. GENETICS IN MEDICINE
- Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA
- (2012) Aaron L. Statham et al. GENOME RESEARCH
- Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk
- (2012) Arie B. Brinkman et al. GENOME RESEARCH
- R-Loop Formation Is a Distinctive Characteristic of Unmethylated Human CpG Island Promoters
- (2012) Paul A. Ginno et al. MOLECULAR CELL
- The functions of microRNAs in pluripotency and reprogramming
- (2012) Trevor R. Leonardo et al. NATURE CELL BIOLOGY
- Global DNA Hypomethylation Prevents Consolidation of Differentiation Programs and Allows Reversion to the Embryonic Stem Cell State
- (2012) Christine S. Schmidt et al. PLoS One
- Trim28 Is Required for Epigenetic Stability During Mouse Oocyte to Embryo Transition
- (2012) D. M. Messerschmidt et al. SCIENCE
- Quantitative Sequencing of 5-Methylcytosine and 5-Hydroxymethylcytosine at Single-Base Resolution
- (2012) M. J. Booth et al. SCIENCE
- Epigenetic Regulation of Nanog by MiR-302 Cluster-MBD2 Completes Induced Pluripotent Stem Cell Reprogramming
- (2012) Man Ryul Lee et al. STEM CELLS
- The KRAB-ZFP/KAP1 System Contributes to the Early Embryonic Establishment of Site-Specific DNA Methylation Patterns Maintained during Development
- (2012) Simon Quenneville et al. Cell Reports
- Dynamic Changes in the Copy Number of Pluripotency and Cell Proliferation Genes in Human ESCs and iPSCs during Reprogramming and Time in Culture
- (2011) Louise C. Laurent et al. Cell Stem Cell
- Unexpected X Chromosome Skewing during Culture and Reprogramming of Human Somatic Cells Can Be Alleviated by Exogenous Telomerase
- (2011) Oz Pomp et al. Cell Stem Cell
- DNA Methylation and SETDB1/H3K9me3 Regulate Predominantly Distinct Sets of Genes, Retroelements, and Chimeric Transcripts in mESCs
- (2011) Mohammad M. Karimi et al. Cell Stem Cell
- Transcription and histone methylation changes correlate with imprint acquisition in male germ cells
- (2011) Amandine Henckel et al. EMBO JOURNAL
- The effects of culture on genomic imprinting profiles in human embryonic and fetal mesenchymal stem cells
- (2011) Jennifer M. Frost et al. Epigenetics
- In Embryonic Stem Cells, ZFP57/KAP1 Recognize a Methylated Hexanucleotide to Affect Chromatin and DNA Methylation of Imprinting Control Regions
- (2011) Simon Quenneville et al. MOLECULAR CELL
- Eutherian mammals use diverse strategies to initiate X-chromosome inactivation during development
- (2011) Ikuhiro Okamoto et al. NATURE
- Somatic coding mutations in human induced pluripotent stem cells
- (2011) Athurva Gore et al. NATURE
- Copy number variation and selection during reprogramming to pluripotency
- (2011) Samer M. Hussein et al. NATURE
- Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells
- (2011) Ryan Lister et al. NATURE
- Mapping and analysis of chromatin state dynamics in nine human cell types
- (2011) Jason Ernst et al. NATURE
- Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells
- (2011) William A. Pastor et al. NATURE
- Regulation of X-chromosome inactivation by the X-inactivation centre
- (2011) Sandrine Augui et al. NATURE REVIEWS GENETICS
- Gene silencing in X-chromosome inactivation: advances in understanding facultative heterochromatin formation
- (2011) Anton Wutz NATURE REVIEWS GENETICS
- Neuronal maturation defect in induced pluripotent stem cells from patients with Rett syndrome
- (2011) K.-Y. Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- De novo DNA methylation: a germ cell perspective
- (2011) Sébastien A. Smallwood et al. TRENDS IN GENETICS
- Angelman syndrome: insights into genomic imprinting and neurodevelopmental phenotypes
- (2011) Angela M. Mabb et al. TRENDS IN NEUROSCIENCES
- Integrating 5-Hydroxymethylcytosine into the Epigenomic Landscape of Human Embryonic Stem Cells
- (2011) Keith E. Szulwach et al. PLoS Genetics
- Derivation of Pre-X Inactivation Human Embryonic Stem Cells under Physiological Oxygen Concentrations
- (2010) Christopher J. Lengner et al. CELL
- A Model for Neural Development and Treatment of Rett Syndrome Using Human Induced Pluripotent Stem Cells
- (2010) Maria C.N. Marchetto et al. CELL
- Female Human iPSCs Retain an Inactive X Chromosome
- (2010) Jason Tchieu et al. Cell Stem Cell
- Distinct Epigenomic Landscapes of Pluripotent and Lineage-Committed Human Cells
- (2010) R. David Hawkins et al. Cell Stem Cell
- Dynamic changes in the human methylome during differentiation
- (2010) L. Laurent et al. GENOME RESEARCH
- A unique chromatin signature uncovers early developmental enhancers in humans
- (2010) Alvaro Rada-Iglesias et al. NATURE
- Mediator and cohesin connect gene expression and chromatin architecture
- (2010) Michael H. Kagey et al. NATURE
- Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
- (2010) R Alan Harris et al. NATURE BIOTECHNOLOGY
- Quantitative comparison of genome-wide DNA methylation mapping technologies
- (2010) Christoph Bock et al. NATURE BIOTECHNOLOGY
- Epigenetic modifications and human disease
- (2010) Anna Portela et al. NATURE BIOTECHNOLOGY
- The NIH Roadmap Epigenomics Mapping Consortium
- (2010) Bradley E Bernstein et al. NATURE BIOTECHNOLOGY
- Variations of X Chromosome Inactivation Occur in Early Passages of Female Human Embryonic Stem Cells
- (2010) Tamar Dvash et al. PLoS One
- Human embryonic stem cells with biological and epigenetic characteristics similar to those of mouse ESCs
- (2010) J. Hanna et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Histone H3K27ac separates active from poised enhancers and predicts developmental state
- (2010) M. P. Creyghton et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Chromatin Signatures in Multipotent Human Hematopoietic Stem Cells Indicate the Fate of Bivalent Genes during Differentiation
- (2009) Kairong Cui et al. Cell Stem Cell
- Histone Deacetylase Inhibition Elicits an Evolutionarily Conserved Self-Renewal Program in Embryonic Stem Cells
- (2009) Carol B. Ware et al. Cell Stem Cell
- KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints
- (2009) David N. Ciccone et al. NATURE
- Human DNA methylomes at base resolution show widespread epigenomic differences
- (2009) Ryan Lister et al. NATURE
- Reprogramming towards pluripotency requires AID-dependent DNA demethylation
- (2009) Nidhi Bhutani et al. NATURE
- Linking DNA methylation and histone modification: patterns and paradigms
- (2009) Howard Cedar et al. NATURE REVIEWS GENETICS
- Conversion of 5-Methylcytosine to 5-Hydroxymethylcytosine in Mammalian DNA by MLL Partner TET1
- (2009) M. Tahiliani et al. SCIENCE
- The Nuclear DNA Base 5-Hydroxymethylcytosine Is Present in Purkinje Neurons and the Brain
- (2009) S. Kriaucionis et al. SCIENCE
- A Maternal-Zygotic Effect Gene, Zfp57, Maintains Both Maternal and Paternal Imprints
- (2008) Xiajun Li et al. DEVELOPMENTAL CELL
- X-inactivation reveals epigenetic anomalies in most hESC but identifies sublines that initiate as expected
- (2008) Lisa L. Hall et al. JOURNAL OF CELLULAR PHYSIOLOGY
- Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
- (2008) Shawn J. Cokus et al. NATURE
- X-chromosome inactivation and epigenetic fluidity in human embryonic stem cells
- (2008) S. S. Silva et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- X-inactivation in female human embryonic stem cells is in a nonrandom pattern and prone to epigenetic alterations
- (2008) Y. Shen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started