4.5 Article

Phylogeography and monophyly of the swordtail fish species Xiphophorus birchmanni (Cyprinodontiformes, Poeciliidae)

期刊

ZOOLOGICA SCRIPTA
卷 37, 期 2, 页码 129-139

出版社

WILEY
DOI: 10.1111/j.1463-6409.2007.00311.x

关键词

-

向作者/读者索取更多资源

We used sequences of the mitochondria control region to assess the distribution of genetic variation within and among populations of the poeciliid fish species Xiphophorus birchmanni. We collected 122 X. birchmanni samples from 11 sites in three drainage systems comprising the distribution of the species. We found low levels of polymorphism among aligned sequences and low levels of genetic variation within populations but high levels of genetic differentiation among populations. Haplotypes are exclusive to three river drainages (Los Hules, Calabozo and San Pedro). Mantel tests revealed correlations between geographical (both straight-line and river distances) and genetic distance, consistent with an isolation by distance scenario, while nested clade analysis suggested allopatric fragmentation between haplotypes from two of the major drainages, and isolation by distance with restricted gene flow within those drainages. Finally, monophyly of X. birchmanni is strongly supported while the previous hypothesis of the evolutionary origin of this species from X. malinche is not.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.5
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Ecology

Do landscape and riverscape shape genetic patterns of the Neotropical otter,Lontra longicaudis, in eastern Mexico?

Maria Camila Latorre-Cardenas, Carla Gutierrez-Rodriguez, Yessica Rico, Enrique Martinez-Meyer

Summary: The study assessed the spatial genetic structure of L. longicaudis in three basins in Veracruz, Mexico with a high degree of ecosystem deterioration. They found that landscape and riverscape characteristics played a significant role in shaping the genetic structure and gene flow of the otter species.

LANDSCAPE ECOLOGY (2021)

Review Zoology

Effects of natural and anthropogenic features on functional connectivity of anurans: a review of landscape genetics studies in temperate, subtropical and tropical species

S. Covarrubias, C. Gonzalez, C. Gutierrez-Rodriguez

Summary: The studies reviewed in this article show that roads have the strongest negative effect on connectivity resistance for anurans in temperate regions. Urbanization, fragmentation, and land cover change into agriculture and grasslands also provide resistance to connectivity for anurans worldwide. In both temperate and tropical regions, rivers are the most important natural element negatively affecting connectivity, while streams and forests cover promote connectivity in all regions. This highlights the importance of considering landscape genetics in conservation plans for anuran species.

JOURNAL OF ZOOLOGY (2021)

Article Ecology

Evolutionary drivers of sexual signal variation in Amazon Slender Anoles

Ivan Prates, Annelise B. D'Angiolella, Miguel T. Rodrigues, Paulo R. Melo-Sampaio, Kevin de Queiroz, Rayna C. Bell

Summary: The study found that dewlap colors of Amazon Slender Anoles vary among populations, but are not segregated in environmental space and show no support for optimized signal transmission at a local scale. Certain phenotypes are negatively associated with sympatric Anolis species with similar dewlap color attributes, suggesting interactions with closely related species promoted dewlap divergence among A. fuscoauratus populations.

EVOLUTION (2021)

Article Evolutionary Biology

Convergent patterns of adaptive radiation between island and mainland Anolis lizards

Jonathan M. Huie, Ivan Prates, Rayna C. Bell, Kevin de Queiroz

Summary: The study aims to uncover convergent and divergent patterns of diversification in Anolis lizards on the Greater Antillean islands and in Central and South America. It found that mainland Anolis exhibit similar ecologies and morphologies to those on the islands, suggesting exceptional morphological convergence between the island and mainland faunas. However, regional differences and historical contingencies can lead to replicate yet variable radiations, indicating that replicated radiations occur more frequently beyond island settings than previously recognized.

BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY (2021)

Article Ecology

Evidence for genetic integration of mating behavior and morphology in a behaviorally plastic alternative reproductive tactic

Melissa N. Liotta, Shasta Kamara, Jessica K. Abbott, Oscar Rios-Cardenas, Molly R. Morris

Summary: This study found genetic integration between behavior and body size in the sneaker males of Xiphophorus multilineatus, with body shape potentially influenced by genetic integration and learning. This suggests that genetic integration may help maintain behavioral plasticity in alternative reproductive tactics.

EVOLUTIONARY ECOLOGY (2021)

Article Marine & Freshwater Biology

Genetic and morphological differentiation in the green swordtail fish, Xiphophorus hellerii: the influence of geographic and environmental factors

Jesus Antonio Rocamontes-Morales, Carla Gutierrez-Rodriguez, Oscar Rios-Cardenas, Pablo C. Hernandez-Romero

Summary: Genetic and morphological variation within Xiphophorus hellerii populations are influenced by geographic and environmental factors, with body shape variations possibly linked to temperature. The study suggests that X. hellerii from different basins and hydrological regions have followed independent evolutionary routes.

HYDROBIOLOGIA (2021)

Article Biochemistry & Molecular Biology

Genomic library preparation and hybridization capture of formalin-fixed tissues and allozyme supernatant for population genomics and considerations for combining capture- and RADseq-based single nucleotide polymorphism data sets

Kyle A. O'Connell, Kevin P. Mulder, Addison Wynn, Kevin de Queiroz, Rayna C. Bell

Summary: This study compared the performance of different sources of genomic DNA for target-capture approach and found that in phylogenetic analyses, all enrichment types for a given specimen clustered together, with capture-based samples clustering together in principal component space, but RADseq samples did not cluster with corresponding capture-based samples.

MOLECULAR ECOLOGY RESOURCES (2022)

Review Genetics & Heredity

Evaluation of copy number variants for genetic hearing loss: a review of current approaches and recent findings

Wafaa Abbasi, Courtney E. French, Shira Rockowitz, Margaret A. Kenna, A. Eliot Shearer

Summary: Structural variations, including changes in copy number, orientation, or location, play a significant role in genetic hearing loss, with copy number variants (CNVs) comprising a substantial proportion of cases. This review summarizes methods for detecting CNVs in genes associated with hearing loss and compiles data on CNVs in hearing loss genes, emphasizing their importance in diagnosis and potential gene therapies.

HUMAN GENETICS (2022)

Article Medicine, Research & Experimental

Pain at the Cochlear Implant Site Requiring Device Removal in Pediatric Patients

A. Eliot Shearer, Alicia Wang, Maranda Lawton, Catherine Lachenauer, Jacob R. Brodsky, Dennis Poe, Margaret Kenna, Greg Licameli

Summary: This study retrospectively reviewed pediatric patients with pain at the cochlear implant site who eventually required device explantation, and found that the majority of patients had chronic bacterial colonization detected during the explantation procedure.

LARYNGOSCOPE (2022)

Article Evolutionary Biology

Interspecific Gene Flow and Mitochondrial Genome Capture during the Radiation of Jamaican Anolis Lizards (Squamata; Iguanidae)

Edward A. Myers, Daniel G. Mulcahy, Bryan Falk, Kiyomi Johnson, Marina Carbi, Kevin de Queiroz

Summary: Gene flow and reticulation play important roles in the diversification of taxonomic groups. In this study on Anolis lizards, we discovered a reticulated species and inferred the phylogeny of the group. Our findings suggest that the genomic data violate assumptions of the coalescent model, and the reticulation event may have facilitated adaptive evolution.

SYSTEMATIC BIOLOGY (2022)

Article Multidisciplinary Sciences

DNA barcoding of the National Museum of Natural History reptile tissue holdings raises concerns about the use of natural history collections and the responsibilities of scientists in the molecular age

Daniel G. Mulcahy, Roberto Ibanez, Cesar A. Jaramillo, Andrew J. Crawford, Julie M. Ray, Steve W. Gotte, Jeremy F. Jacobs, Addison H. Wynn, Gracia P. Gonzalez-Porter, Roy W. McDiarmid, Ronald Crombie, George R. Zug, Kevin de Queiroz

Summary: Natural history collections are crucial for biology research, but they currently lack funding and staff face heavy workloads. Scientists are creating large DNA barcode libraries to document and conserve biodiversity, but mistakes are common. Therefore, it is important to raise awareness of these issues and provide advice to maintain accurate records of Earth's biodiversity.

PLOS ONE (2022)

Article Medicine, Research & Experimental

Otolaryngologic Manifestations of Trisomy 13 and Trisomy 18 in Pediatric Patients

Jalen Benson, Candace Stewart, Margaret A. Kenna, A. Eliot Shearer

Summary: The objective of this study was to comprehensively describe the otolaryngologic clinical characteristics and procedures required for patients with trisomy 13 and trisomy 18. The results showed that most patients required multidisciplinary management, and the most common diagnoses were gastroesophageal reflux disease, dysphagia, otitis media, and obstructive sleep apnea.

LARYNGOSCOPE (2023)

Article Medicine, Research & Experimental

Exome Sequencing Expands the Genetic Diagnostic Spectrum for Pediatric Hearing Loss

Julia Perry, Shelby Redfield, Andrea Oza, Stephanie Rouse, Candace Stewart, Harmon Khela, Tarika Srinivasan, Victoria Albano, Eliot Shearer, Margaret Kenna

Summary: Exome sequencing (ES) is an effective genetic diagnostic method for patients with bilateral symmetric, bilateral asymmetric, and unilateral hearing loss (HL), allowing the discovery of secondary findings, deafness-causing genes, and efficient data re-analysis.

LARYNGOSCOPE (2023)

Article Biodiversity Conservation

The first genomic resource for the 'near threatened' Neotropical otter Lontra longicaudis (Carnivora: Mustelidae): mitochondrial genome characterisation and insights into phylomitogenomic relationships in the family Mustelidae

J. Antonio Baeza, Austin Macdonald-Shedd, Maria Camila Latorre-Cardenas, Erin Griffin, Carla Gutierrez-Rodriguez

Summary: This study presents the first genomic resource for the Neotropical otter L. longicaudis, providing detailed characterization of its mitochondrial genome. The AT-rich mitochondrial genome of L. longicaudis is 16,436 bp in length and encodes 13 protein coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and a putative control region. The study also provides important insights into the genomic features and phylogenetic relationships of L. longicaudis.

JOURNAL OF NATURAL HISTORY (2023)

Article Medicine, Research & Experimental

Vestibular Preservation in Pediatric Cochlear Implantation

Greg R. Licameli, Alicia Wang, Guangwei Zhou, David Faller, Margaret Kenna, Dennis Poe, Eliot Shearer, Linda Oster, Jacob R. Brodsky

Summary: This retrospective case review evaluated the rate of preserved vestibular function in pediatric cochlear implant surgery. The results showed a higher rate of preservation of vestibular function in children after cochlear implantation, possibly due to contemporary, less traumatic electrodes and insertion techniques. Further study is needed to explore the impact of different cochlear implant electrode designs and insertion approaches on post-operative vestibular preservation.

LARYNGOSCOPE (2023)

暂无数据