Specific Archaeal Communities are Selected on the Root Surfaces of Ruppia spp. and Phragmites australis

Illumina Sequencing of 16S rRNA Tag Revealed Spatial Variations of Bacterial Communities in a Mangrove Wetland

(2013) Xiao-Tao Jiang et al.   MICROBIAL ECOLOGY

Predominant archaea in marine sediments degrade detrital proteins

(2013) Karen G. Lloyd et al.   NATURE

Denaturing Gradient Gel Electrophoresis and Barcoded Pyrosequencing Reveal Unprecedented Archaeal Diversity in Mangrove Sediment and Rhizosphere Samples

(2012) Ana C. C. Pires et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Emergent Macrophytes Act Selectively on Ammonia-Oxidizing Bacteria and Archaea

(2012) Rosalia Trias et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

“Methanoplasmatales,” Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens

(2012) Kristina Paul et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of rhizosphere prokaryotic diversity in a horizontal subsurface flow constructed wetland using a PCR cloning-sequencing based approach

(2012) Moez Bouali et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Archaeal abundance in relation to root and fungal exudation rates

(2012) Anna E. Karlsson et al.   FEMS MICROBIOLOGY ECOLOGY

Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces

(2012) B. Dridi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments

(2012) Kyoko Kubo et al.   ISME Journal

Influence of Season and Plant Species on the Abundance and Diversity of Sulfate Reducing Bacteria and Ammonia Oxidizing Bacteria in Constructed Wetland Microcosms

(2012) Jennifer L. Faulwetter et al.   MICROBIAL ECOLOGY

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Abundance of anammox bacteria in different wetland soils

(2012) Sylvia Humbert et al.   Environmental Microbiology Reports

Active bacteria and archaea cells fixing bicarbonate in the dark along the water column of a stratified eutrophic lagoon

(2011) Marc Llirós et al.   FEMS MICROBIOLOGY ECOLOGY

Effects of selected root exudate components on soil bacterial communities

(2011) Shengjing Shi et al.   FEMS MICROBIOLOGY ECOLOGY

Seasonal dynamics of soluble carbohydrates in rhizomes of Phragmites australis and Typha latifolia

(2011) Nihat Tursun et al.   FLORA

Biofilm recovery in a wastewater treatment plant-influenced stream and spatial segregation of ammonia-oxidizing microbial populations

(2011) Stephanie N. Merbt et al.   LIMNOLOGY AND OCEANOGRAPHY

Vertical Distribution of Ammonia-Oxidizing Crenarchaeota and Methanogens in the Epipelagic Waters of Lake Kivu (Rwanda-Democratic Republic of the Congo)

(2010) M. Lliros et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Denitrification rates and community structure of denitrifying bacteria in newly constructed wetland

(2010) Keunyea Song et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Seasonality and resource availability control bacterial and archaeal communities in soils of a temperate beech forest

(2010) Frank Rasche et al.   ISME Journal

Effect of Lake Trophic Status and Rooted Macrophytes on Community Composition and Abundance of Ammonia-Oxidizing Prokaryotes in Freshwater Sediments

(2009) M. Herrmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects of plant diversity on microbial biomass and community metabolic profiles in a full-scale constructed wetland

(2009) Chong-Bang Zhang et al.   ECOLOGICAL ENGINEERING

Specific rhizosphere bacterial and fungal groups respond differently to elevated atmospheric CO2

(2009) Barbara Drigo et al.   ISME Journal

Global ecological patterns in uncultured Archaea

(2009) Jean-Christophe Auguet et al.   ISME Journal

Diversity and Community Structure of Archaea Inhabiting the Rhizoplane of Two Contrasting Plants from an Acidic Bog

(2009) Hinsby Cadillo-Quiroz et al.   MICROBIAL ECOLOGY

Archaea in dry soil environments

(2009) Sari Timonen et al.   PHYTOCHEMISTRY REVIEWS

The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors

(2009) M. Buée et al.   PLANT AND SOIL

Removal of nitrogen in constructed wetlands with horizontal sub-sureface flow: a review

(2009) Jan Vymazal et al.   WETLANDS

Archaea Dominate the Ammonia-Oxidizing Community in the Rhizosphere of the Freshwater Macrophyte Littorella uniflora

(2008) M. Herrmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Disentangling the rhizosphere effect on nitrate reducers and denitrifiers: insight into the role of root exudates

(2008) S. Henry et al.   ENVIRONMENTAL MICROBIOLOGY

Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment

(2008) James I. Prosser et al.   ENVIRONMENTAL MICROBIOLOGY

High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study

(2008) Marc Llirós et al.   FEMS MICROBIOLOGY ECOLOGY

Soil type links microbial colonization of rice roots to methane emission

(2008) RALF CONRAD et al.   GLOBAL CHANGE BIOLOGY

Significant contribution of Archaea to extant biomass in marine subsurface sediments

(2008) Julius S. Lipp et al.   NATURE

Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

(2008) Céline Brochier-Armanet et al.   NATURE REVIEWS MICROBIOLOGY

Environmental and anthropogenic controls over bacterial communities in wetland soils

(2008) W. H. Hartman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA