Seasonal dynamics of bacterial and archaeal methanogenic communities in flooded rice fields and effect of drainage

Methane emission and dynamics of methanotrophic and methanogenic communities in a flooded rice field ecosystem

(2014) Hyo Jung Lee et al.   FEMS MICROBIOLOGY ECOLOGY

Effects of Water-Saving Irrigation on Emissions of Greenhouse Gases and Prokaryotic Communities in Rice Paddy Soil

(2014) Jae-Hyung Ahn et al.   MICROBIAL ECOLOGY

Methane and nitrous oxide emissions from rice and maize production in diversified rice cropping systems

(2014) Sebastian Weller et al.   NUTRIENT CYCLING IN AGROECOSYSTEMS

Stable carbon isotope biogeochemistry of propionate and acetate in methanogenic soils and lake sediments

(2014) R. Conrad et al.   ORGANIC GEOCHEMISTRY

Rice biomass production and carbon cycling in 13CO2 pulse-labeled microcosms with different soils under submerged conditions

(2014) Judith Pump et al.   PLANT AND SOIL

Structure and function of the methanogenic microbial communities in Uruguayan soils shifted between pasture and irrigated rice fields

(2013) Ana Fernandez Scavino et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial community variations in an alfalfa-rice rotation system revealed by 16S rRNA gene 454-pyrosequencing

(2013) Ana R. Lopes et al.   FEMS MICROBIOLOGY ECOLOGY

Optimizing rice yields while minimizing yield-scaled global warming potential

(2013) Cameron M. Pittelkow et al.   GLOBAL CHANGE BIOLOGY

Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses

(2013) Steven J Blazewicz et al.   ISME Journal

Seasonal Transition of Active Bacterial and Archaeal Communities in Relation to Water Management in Paddy Soils

(2013) Hideomi Itoh et al.   MICROBES AND ENVIRONMENTS

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Set Up of an Automatic Water Quality Sampling System in Irrigation Agriculture

(2013) Emanuel Heinz et al.   SENSORS

Methanogens at the top of the world: occurrence and potential activity of methanogens in newly deglaciated soils in high-altitude cold deserts in the Western Himalayas

(2013) Katrin Aschenbach et al.   Frontiers in Microbiology

Methane emissions from wetlands: biogeochemical, microbial, and modeling perspectives from local to global scales

(2012) Scott D. Bridgham et al.   GLOBAL CHANGE BIOLOGY

Methanogenic Pathway and Archaeal Communities in Three Different Anoxic Soils Amended with Rice Straw and Maize Straw

(2012) Ralf Conrad et al.   Frontiers in Microbiology

Assimilation of glucose-derived carbon into methanogenic archaea in soil under unflooded condition

(2011) Takeshi Watanabe et al.   APPLIED SOIL ECOLOGY

The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology

(2011) Michael Pester et al.   CURRENT OPINION IN MICROBIOLOGY

Methanogenic archaea are globally ubiquitous in aerated soils and become active under wet anoxic conditions

(2011) Roey Angel et al.   ISME Journal

Massive multiplication of genome and ribosomes in dormant cells (akinetes) of Aphanizomenon ovalisporum (Cyanobacteria)

(2011) Assaf Sukenik et al.   ISME Journal

Activation of Methanogenesis in Arid Biological Soil Crusts Despite the Presence of Oxygen

(2011) Roey Angel et al.   PLoS One

Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems

(2011) Lucie Zinger et al.   PLoS One

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

(2011) Patrick D. Schloss et al.   PLoS One

Bacterial Communities Associated with the Lichen Symbiosis

(2010) Scott T. Bates et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Influence of Plant Polymers on the Distribution and Cultivation of Bacteria in the PhylumAcidobacteria

(2010) Stephanie A. Eichorst et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Acidobacteria, Rubrobacteridae and Chloroflexi are abundant among very slow-growing and mini-colony-forming soil bacteria

(2010) Kathryn E. R. Davis et al.   ENVIRONMENTAL MICROBIOLOGY

Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?

(2010) Paul G. Dennis et al.   FEMS MICROBIOLOGY ECOLOGY

Effect of nitrogen fertilization on methane oxidation, abundance, community structure and gene expression of methanotrophs in the rice rhizosphere

(2010) Minita Shrestha et al.   ISME Journal

Anaerobic Oxidation of Methane: Progress with an Unknown Process

(2009) Katrin Knittel et al.   Annual Review of Microbiology

Succession of Bacterial Populations during Plant Residue Decomposition in Rice Field Soil

(2009) J. Rui et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Functional and structural response of the methanogenic microbial community in rice field soil to temperature change

(2009) Ralf Conrad et al.   ENVIRONMENTAL MICROBIOLOGY

Distribution Patterns of the Members of Phylum Acidobacteria in Global Soil Samples

(2009) Sang-Hoon Lee   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

The global methane cycle: recent advances in understanding the microbial processes involved

(2009) Ralf Conrad   Environmental Microbiology Reports

Dynamics of the Methanogenic Archaeal Community during Plant Residue Decomposition in an Anoxic Rice Field Soil

(2008) J. Peng et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Transcriptional activity of paddy soil bacterial communities

(2008) Pravin Malla Shrestha et al.   ENVIRONMENTAL MICROBIOLOGY

Soil type links microbial colonization of rice roots to methane emission

(2008) RALF CONRAD et al.   GLOBAL CHANGE BIOLOGY

Distinct members of a stable methanogenic archaeal community transcribe mcrA genes under flooded and drained conditions in Japanese paddy field soil

(2008) Takeshi Watanabe et al.   SOIL BIOLOGY & BIOCHEMISTRY

Comparison of bacterial community structures at main habitats in paddy field ecosystem based on DGGE analysis

(2007) Susumu Asakawa et al.   SOIL BIOLOGY & BIOCHEMISTRY