Isolation of microorganisms involved in reduction of crystalline iron(III) oxides in natural environments

Ultra-high-sensitivity stable-isotope probing of rRNA by high-throughput sequencing of isopycnic centrifugation gradients

(2015) Tomo Aoyagi et al.   Environmental Microbiology Reports

Evidence of Environmental and Vertical Transmission of Burkholderia Symbionts in the Oriental Chinch Bug, Cavelerius saccharivorus (Heteroptera: Blissidae)

(2014) Hideomi Itoh et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Direct interspecies electron transfer accelerates syntrophic oxidation of butyrate in paddy soil enrichments

(2014) Huijuan Li et al.   ENVIRONMENTAL MICROBIOLOGY

Long-term nitrogen fertilization of paddy soil shifts iron-reducing microbial community revealed by RNA-13C-acetate probing coupled with pyrosequencing

(2014) Long-Jun Ding et al.   ISME Journal

The Combination of Functional Metagenomics and an Oil-Fed Enrichment Strategy Revealed the Phylogenetic Diversity of Lipolytic Bacteria Overlooked by the Cultivation-Based Method

(2014) Takashi Narihiro et al.   MICROBES AND ENVIRONMENTS

Methane fluxes show consistent temperature dependence across microbial to ecosystem scales

(2014) Gabriel Yvon-Durocher et al.   NATURE

The interplay of microbially mediated and abiotic reactions in the biogeochemical Fe cycle

(2014) Emily D. Melton et al.   NATURE REVIEWS MICROBIOLOGY

Isolation of Butanol- and Isobutanol-Tolerant Bacteria and Physiological Characterization of Their Butanol Tolerance

(2013) Manabu Kanno et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ardenticatena maritima gen. nov., sp. nov., a ferric iron- and nitrate-reducing bacterium of the phylum 'Chloroflexi' isolated from an iron-rich coastal hydrothermal field, and description of Ardenticatenia classis nov.

(2013) S. Kawaichi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Cultivating Yet-to-be Cultivated Microbes: The Challenge Continues

(2013) Takashi Narihiro et al.   MICROBES AND ENVIRONMENTS

Iron oxide nanoparticles in geomicrobiology: from biogeochemistry to bioremediation

(2013) Juliane Braunschweig et al.   New Biotechnology

Syntrophic Oxidation of Propionate in Rice Field Soil at 15 and 30°C under Methanogenic Conditions

(2012) Yanlu Gan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial cultivation and the role of microbial resource centers in the omics era

(2012) Om Prakash et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Geobacter luticola sp. nov., an Fe(III)-reducing bacterium isolated from lotus field mud

(2012) S. Viulu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Are Uncultivated Bacteria Really Uncultivable?

(2012) Indun Dewi Puspita et al.   MICROBES AND ENVIRONMENTS

Preservation of organic matter in sediments promoted by iron

(2012) Karine Lalonde et al.   NATURE

Microbial interspecies electron transfer via electric currents through conductive minerals

(2012) S. Kato et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Enriched Iron(III)-Reducing Bacterial Communities are Shaped by Carbon Substrate and Iron Oxide Mineralogy

(2012) Christopher J. Lentini et al.   Frontiers in Microbiology

Effects of Methanogenic Inhibitors on Methane Production and Abundances of Methanogens and Cellulolytic Bacteria inIn VitroRuminal Cultures

(2011) Zhenming Zhou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Impact of Aridification and Vegetation Type on Changes in the Community Structure of Methane-Cycling Microorganisms in Japanese Wetland Soils

(2011) Takashi NARIHIRO et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Reduction of structural Fe(III) in oxyhydroxides by Shewanella decolorationis S12 and characterization of the surface properties of iron minerals

(2011) Xiaomin Li et al.   JOURNAL OF SOILS AND SEDIMENTS

Distinctive Responses of Metabolically Active Microbiota to Acidification in a Thermophilic Anaerobic Digester

(2011) Masateru Akuzawa et al.   MICROBIAL ECOLOGY

Detection of active, potentially acetate-oxidizing syntrophs in an anaerobic digester by flux measurement and formyltetrahydrofolate synthetase (FTHFS) expression profiling

(2011) T. Hori et al.   MICROBIOLOGY-SGM

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Respiratory interactions of soil bacteria with (semi)conductive iron-oxide minerals

(2010) Souichiro Kato et al.   ENVIRONMENTAL MICROBIOLOGY

Contrasting effects of Al substitution on microbial reduction of Fe(III) (hydr)oxides

(2010) Eileen B. Ekstrom et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Biogeochemical Redox Processes and their Impact on Contaminant Dynamics

(2009) Thomas Borch et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Solubility and dissimilatory reduction kinetics of iron(III) oxyhydroxides: A linear free energy relationship

(2009) Steeve Bonneville et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Mineralogical and morphological constraints on the reduction of Fe(III) minerals by Geobacter sulfurreducens

(2009) R.S. Cutting et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Identification of iron-reducing microorganisms in anoxic rice paddy soil by 13C-acetate probing

(2009) Tomoyuki Hori et al.   ISME Journal

Physiology, Ecology, Phylogeny, and Genomics of Microorganisms Capable of Syntrophic Metabolism

(2008) Michael J. McInerney et al.   Annals of the New York Academy of Sciences

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Long-term dynamics of uranium reduction/reoxidation under low sulfate conditions

(2008) John Komlos et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Syntrophic Acetate-Oxidizing Microbes in Methanogenic Environments

(2008) Satoshi Hattori   MICROBES AND ENVIRONMENTS