Observation of long-range tertiary interactions during ligand binding by the TPP riboswitch aptamer

Asymmetric Unwrapping of Nucleosomes under Tension Directed by DNA Local Flexibility

(2015) Thuy T.M. Ngo et al.   CELL

Direct observation of structure-function relationship in a nucleic acid-processing enzyme

(2015) M. J. Comstock et al.   SCIENCE

Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways

(2015) Sukrit Suksombat et al.   eLife

A DNA-based molecular probe for optically reporting cellular traction forces

(2014) Brandon L Blakely et al.   NATURE METHODS

A Decade of Riboswitches

(2013) Alexander Serganov et al.   CELL

Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution

(2013) Andrea Haller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolite Recognition Principles and Molecular Mechanisms Underlying Riboswitch Function

(2012) Alexander Serganov et al.   Annual Review of Biophysics

Folding energy landscape of the thiamine pyrophosphate riboswitch aptamer

(2012) P. C. Anthony et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Combined versatile high-resolution optical tweezers and single-molecule fluorescence microscopy

(2012) George Sirinakis et al.   REVIEW OF SCIENTIFIC INSTRUMENTS

Identifying Molecular Dynamics in Single-Molecule FRET Experiments with Burst Variance Analysis

(2011) Joseph P. Torella et al.   BIOPHYSICAL JOURNAL

MSMBuilder2: Modeling Conformational Dynamics on the Picosecond to Millisecond Scale

(2011) Kyle A. Beauchamp et al.   Journal of Chemical Theory and Computation

Ultrahigh-resolution optical trap with single-fluorophore sensitivity

(2011) Matthew J Comstock et al.   NATURE METHODS

Combining optical trapping, fluorescence microscopy and micro-fluidics for single molecule studies of DNA–protein interactions

(2011) Andrea Candelli et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Mechanisms and advancement of antifading agents for fluorescence microscopy and single-molecule spectroscopy

(2011) Thorben Cordes et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Optimizing Methods to Recover Absolute FRET Efficiency from Immobilized Single Molecules

(2010) James J. McCann et al.   BIOPHYSICAL JOURNAL

The Effect of Dye-Dye Interactions on the Spatial Resolution of Single-Molecule FRET Measurements in Nucleic Acids

(2010) Nicolas Di Fiori et al.   BIOPHYSICAL JOURNAL

The Structural and Functional Diversity of Metabolite-Binding Riboswitches

(2009) Adam Roth et al.   Annual Review of Biochemistry

On the Mechanism of Trolox as Antiblinking and Antibleaching Reagent

(2009) Thorben Cordes et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Counting RAD51 proteins disassembling from nucleoprotein filaments under tension

(2008) Joost van Mameren et al.   NATURE

See me, feel me: methods to concurrently visualize and manipulate single DNA molecules and associated proteins

(2008) J. van Mameren et al.   NUCLEIC ACIDS RESEARCH

Direct Observation of Hierarchical Folding in Single Riboswitch Aptamers

(2008) W. J. Greenleaf et al.   SCIENCE