Article
Veterinary Sciences
Luis M. Hernandez-Triana, Javier A. Garza-Hernandez, Aldo Ortega Morales, Sean W. J. Prosser, Paul D. N. Hebert, Nadya Nikolova, Elsa Barrero, Erick de J. de Luna-Santillana, Vicente H. Gonzalez-Alvarez, Ramon Mendez-Lopez, Rahuel J. Chan-Chable, Anthony R. Fooks, Mario A. Rodriguez-Perez
Summary: This study in Mexico analyzed mosquito feeding preferences and blood meal sources from RNA extracts, identifying multiple organisms from a single extract for the first time. A total of 1,634 mosquito specimens were collected, with four new species records for Mexico and nine new records for Chiapas State. High intraspecific divergence values were observed in certain taxa, and blood meal analysis revealed feeding preferences of different mosquito species.
FRONTIERS IN VETERINARY SCIENCE
(2021)
Article
Engineering, Marine
Bo Liu, Yali Yan, Nan Zhang, Huayang Guo, Baosuo Liu, Jingwen Yang, Kecheng Zhu, Dianchang Zhang
Summary: Species markers can be assessed quickly and accurately using DNA barcoding. In this study, we used DNA barcoding to investigate the parrotfish family Scaridae in Hainan, and found that DNA barcoding can be an effective tool for monitoring, protecting, and managing fisheries, as well as for addressing taxonomic issues.
JOURNAL OF MARINE SCIENCE AND ENGINEERING
(2022)
Article
Multidisciplinary Sciences
Jeganathan Pandiyan, Arun Zachariah, Bathrachalam Chandramohan, Shahid Mahboob, Khalid A. Al-Ghanim, Zaib-Un-Nisa, Marcello Nicoletti, Marimuthu Govindarajan
Summary: This study used cytochrome c oxidase I (COI) to analyze the DNA barcodes and assess the relationship among waterbird species. The phylogenetic tree and sequence alignment of COI revealed genetic differences and conserved haplotypes among the species.
JOURNAL OF KING SAUD UNIVERSITY SCIENCE
(2022)
Article
Entomology
Wolfgang Paill, Stephan Koblmueller, Thomas Friess, Barbara-Amina Gereben-Krenn, Christian Mairhuber, Michael J. Raupach, Lukas Zangl
Summary: The study provides the first reliable record of Pterostichus adstrictus in the Austrian Alps, confirming its southernmost distribution edge. Further research demonstrates the seasonal occurrence and habitat preferences of P. adstrictus in the region.
Review
Zoology
Cheng-Qi Zhu, Xiao-Dong Xu, Ying Zhen
Summary: The Luciolinae genus Emeia was studied and classified in this research. Phylogenetic analysis based on DNA barcoding sequences determined the classification of Emeia genus and revealed a new species. A key for identifying Emeia species using males is provided in the article.
Article
Biochemistry & Molecular Biology
Lynne M. Christianson, Shannon B. Johnson, Darrin T. Schultz, Steven H. D. Haddock
Summary: Despite historical difficulties in studying ctenophores, new primers have successfully amplified COI fragments, highlighting high diversity and supporting ecological and morphological differences among species. These new tools provide important advancements for researchers in exploring ctenophore diversity on a global scale.
MOLECULAR ECOLOGY RESOURCES
(2022)
Article
Multidisciplinary Sciences
Muhammad Ashfaq, Arif M. Khan, Akhtar Rasool, Saleem Akhtar, Naila Nazir, Nazeer Ahmed, Farkhanda Manzoor, Jayme Sones, Kate Perez, Ghulam Sarwar, Azhar A. Khan, Muhammad Akhter, Shafqat Saeed, Riffat Sultana, Hafiz Muhammad Tahir, Muhammad A. Rafi, Romana Iftikhar, Muhammad Tayyib Naseem, Mariyam Masood, Muhammad Tufail, Santosh Kumar, Sabila Afzal, Jaclyn McKeown, Ahmed Ali Samejo, Imran Khaliq, Michelle L. D'Souza, Shahid Mansoor, Paul D. N. Hebert
Summary: This study used DNA barcoding to survey the insect diversity in Pakistan and found that the knowledge about insect species in Pakistan is limited. Most species can only be classified into order and family, with only a small portion classified into genus and species. The study also found that a majority of the insect species in Pakistan are unique to the country, but some species are also reported in neighboring countries.
Review
Agriculture, Dairy & Animal Science
Saima Naz, Ahmad Manan Mustafa Chatha, Rifat Ullah Khan
Summary: DNA barcoding and mini barcoding using COI gene are effective methods for accurate identification of species and biodiversity. This study aims to develop a reference database of fishes and evaluate the applicability of COI gene for species identification. The observed sequence length for fish species in DNA barcoding was 500-700 base pairs, while for DNA mini barcoding, it was 80-650 base pairs. These methods not only describe known and unknown samples, but also detect previously un-sampled species. Overall, these methods are important for species identification, conservation, and management of biodiversity.
ANNALS OF ANIMAL SCIENCE
(2023)
Article
Zoology
Chengqi Zhu, Xiaodong Xu, Ying Zhen
Summary: Two new species of the genus Pyrocoelia were described from Mt. Cenwanglaoshan of Guangxi, Southwest China. These new species were distinguished from other known species based on external morphological characters and male genitalia. In addition, the distribution of Pyrocoelia species in China was summarized.
Article
Cell Biology
Jia Shi, Yi Yang, Ya-Nan Wang, Qing Li, Xue Xing, An-Ying Cheng, Xiao-Na Zhan, Jie Li, Gang Xu, Fan He
Summary: This study reveals the association between metabolism and the progression of vascular calcification in chronic kidney disease (CKD). High phosphate and uremic serum enhance mitochondrial respiration capacity in vascular smooth muscle cells (VSMCs), while glycolysis level remains unchanged. Suppression of cytochrome c oxidase (COX) activity attenuates vascular calcification.
CELL DEATH & DISEASE
(2022)
Article
Biodiversity Conservation
Rodrigue Orobiyi Edeya Pelebe, Ibrahim Imorou Toko, Erik Verheyen, Maarten Van Steenberge
Summary: The study revealed that the population of Sarotherodon melanotheron in the Atchakpa reservoir may have resulted from a natural range extension within Benin. The subspecies S. m. melanotheron has also been previously introduced in the Philippines. Further research is necessary to investigate the socioeconomic, ecological, and environmental impacts of this species in the reservoir.
Article
Multidisciplinary Sciences
Gizem Inak, Agnieszka Rybak-Wolf, Pawel Lisowski, Tancredi M. Pentimalli, Rene Juettner, Petar Glazar, Karan Uppal, Emanuela Bottani, Dario Brunetti, Christopher Secker, Annika Zink, David Meierhofer, Marie-Therese Henke, Monishita Dey, Ummi Ciptasari, Barbara Mlody, Tobias Hahn, Maria Berruezo-Llacuna, Nikos Karaiskos, Michela Di Virgilio, Johannes A. Mayr, Saskia B. Wortmann, Josef Priller, Michael Gotthardt, Dean P. Jones, Ertan Mayatepek, Werner Stenzel, Sebastian Diecke, Ralf Kuehn, Erich E. Wanker, Nikolaus Rajewsky, Markus Schuelke, Alessandro Prigione
Summary: Leigh syndrome (LS) is a severe neurometabolic disorder lacking effective models. This study found that LS carrying mutations in SURF1 gene exhibit impaired neuronal morphogenesis due to metabolic deficiencies.
NATURE COMMUNICATIONS
(2021)
Article
Biochemistry & Molecular Biology
Rene F. F. Gorriz, Senta Volkenandt, Petra Imhof
Summary: Cytochrome c Oxidase (CcO) is a membrane protein that uses the energy of oxygen reduction to water to pump protons against an electrochemical gradient. Two distinct channels, D-channel and K-channel, transport the required protons for this reaction and pumped protons in a step-wise and regulated manner. By conducting molecular dynamics simulations, the effect of protonation on these channels was analyzed. The protonation state of the channels affects the hydration level and proton transfer ability, but there is no significant direct effect between the protonation states of the two channels. The regulation of proton uptake and passage in the channels must be achieved through other means of communication, such as the location of the reducing electron.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Chemistry, Multidisciplinary
Guoliang Zhu, Hui Zeng, Shuangbo Zhang, Jana Juli, Linhua Tai, Danyang Zhang, Xiaoyun Pang, Yan Zhang, Sin Man Lam, Yun Zhu, Guohong Peng, Hartmut Michel, Fei Sun
Summary: The study elucidated the structure of a hyperthermophilic bacterium cytochrome c oxidase, revealing a unique dimeric structure essential for naphthoquinol binding. This suggests an evolutionary adaptation of the oxidase to its hyperthermophilic environment, shedding light on the structural variation of cytochrome c oxidases in different species.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
(2021)
Article
Zoology
David Selnekovic, Katarina Goffova, Jan Soltys, Eva Kovacova, Jan Kodada
Summary: The study describes a new species of Mordellistena (s. str.) platypoda found on the island of Ischia in Italy, based on morphological characters and genetic analysis. The analysis shows that M. platypoda is closely related to M. tarsata, but they differ significantly in vestiture colouration, presence of lateral ctenidia on the third metatarsomere, and presence of sexual dimorphism on the protibia. Interestingly, the new species is currently known only from Ischia and no additional specimens were found in museum material.
Article
Multidisciplinary Sciences
Sonu Yadav, Russell Pickford, Robert A. Zammit, J. William O. Ballard
Summary: The dingo's metabolome is significantly different from domestic dog breeds, with notable variations in protein and lipid metabolites. Hybridization between dingoes and domestic dogs may influence carbohydrate metabolism, potentially due to differences in genetic factors such as amylase 2B copy number.
SCIENTIFIC REPORTS
(2021)
Article
Zoology
J. William O. Ballard, Chloe Gardner, Lucille Ellem, Sonu Yadav, Richard Kemp
Summary: Dogs, as the first domesticated animals, are an important model for studying domestication. This study compared eye contact and sociability between Australian dingoes, Basenji dogs, and German Shepherd dogs. The results showed that dingoes exhibited different behaviors compared to breed dogs, suggesting that they were not domesticated before arriving in Australia.
Article
Evolutionary Biology
Yunlan Jiang, Lu Yue, Fan Yang, Jessica P. Gillung, Shaun L. Winterton, Benjamin W. Price, Atilano Contreras-Ramos, Fumio Hayashi, Ulrike Aspoeck, Horst Aspoeck, David K. Yeates, Ding Yang, Xingyue Liu
Summary: The breakup of Pangaea has played a crucial role in shaping the biogeographical patterns of terrestrial biotas since the Middle Jurassic, with aquatic insects presenting valuable insights into biogeographical hypotheses due to their unique distribution patterns and divergences. The phylogeny of Megaloptera, based on extensive mitochondrial genome sequencing, indicates deep divergences predating Pangaea's breakup, with subsequent intergeneric divergences driven by both vicariance and dispersal during the Cretaceous, resulting in complex and incongruent biogeographical signals. The colonization of corydalids from Eurasia to the south and Eurasian alderflies from the south to the north during the Cretaceous demonstrates diverse dispersal patterns in response to shifting continents.
Article
Multidisciplinary Sciences
Matt A. Field, Sonu Yadav, Olga Dudchenko, Meera Esvaran, Benjamin D. Rosen, Ksenia Skvortsova, Richard J. Edwards, Jens Keilwagen, Blake J. Cochran, Bikash Manandhar, Sonia Bustamante, Jacob Agerbo Rasmussen, Richard G. Melvin, Barry Chernoff, Arina Omer, Zane Colaric, Eva K. F. Chan, Andre E. Minoche, Timothy P. L. Smith, M. Thomas P. Gilbert, Ozren Bogdanovic, Robert A. Zammit, Torsten Thomas, Erez L. Aiden, J. William O. Ballard
Summary: Research shows that there are significant genetic differences between dingoes and breed dogs, which may be due to different demographic and environmental conditions. Differences have also been observed in the methylation patterns, serum biochemistry, and microbiome makeup between dingoes and breed dogs.
Article
Biochemistry & Molecular Biology
Howard T. Jacobs, J. William O. Ballard
Summary: The physiological role of alternative oxidase (AOX) in animals is still poorly understood. Accumulated evidence suggests that AOX may help animals resist various stresses, but further research is needed to address why AOX has been lost in certain animal groups.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
(2022)
Article
Biochemistry & Molecular Biology
Samuel G. Towarnicki, Neil A. Youngson, Susan M. Corley, Jus C. St John, Richard G. Melvin, Nigel Turner, Margaret J. Morris, J. William O. Ballard
Summary: Studies have shown that ancestral life experiences, particularly stress and diet, can influence the growth, metabolism, and behavior of future generations. This research focuses on the non-genetic inheritance between fertilization and adulthood, revealing that ancestral dietary macronutrient composition and quantity can impact the developmental timing of descendants through changes in specific signaling pathways.
Article
Genetics & Heredity
Gabriella Assante, Sriram Chandrasekaran, Stanley Ng, Aikaterini Tourna, Carolina H. Chung, Kowsar A. Isse, Jasmine L. Banks, Ugo Soffientini, Celine Filippi, Anil Dhawan, Mo Liu, Steven G. Rozen, Matthew Hoare, Peter Campbell, J. William O. Ballard, Nigel Turner, Margaret J. Morris, Shilpa Chokshi, Neil A. Youngson
Summary: The research demonstrates that metabolically driven histone hyperacetylation in steatotic hepatocytes can increase DNA damage, thus initiating the development of HCC.
Article
Evolutionary Biology
Braxton R. Jones, Paul D. Brock, Barbara Mantovani, Perry Beasley-Hall, David K. Yeates, Nathan Lo
Summary: The taxonomy of the Austrocarausius stick insect genus was revised using morphological and molecular analyses, resulting in the discovery of nine new species. The study also estimated the evolutionary timescale of the genus and found that the species diversified over the last 25-70 million years, with endemic distributions in the tropical rainforests of central and northern Queensland.
INVERTEBRATE SYSTEMATICS
(2022)
Article
Multidisciplinary Sciences
Isaac S. Winkler, Ashley H. Kirk-Spriggs, Keith M. Bayless, John Soghigian, Rudolf Meier, Thomas Pape, David K. Yeates, A. Bernardo Carvalho, Robert S. Copeland, Brian M. Wiegmann
Summary: The Ephydroidea superfamily is divided into eight families, including several small groups with challenging taxonomic placement. To address this issue, researchers conducted phylogenomic sampling and found that Ephydridae is an early branching group, and Mormotomyiidae is the sister lineage to all other families. This study reaffirms the importance of sampling both taxa and characters in phylogenomic reconstruction.
Article
Zoology
Tyler J. J. Lepan, Thy T. T. Truong, Sonu Yadav, J. William O. Ballard
Summary: Olfaction is a widespread mode of communication in mammals. This study aimed to compare the volatile organic compounds (VOCs) in the scat of a dingo and a domestic German Shepherd Dog (GSD) using headspace solid phase microextraction (HS-SPME) with gas chromatography-mass spectrometry (GC-MS). The results showed significant differences in VOC composition between dingoes and GSDs, suggesting the potential use of these differences in dingo management strategies.
AUSTRALIAN JOURNAL OF ZOOLOGY
(2022)
Correction
Genetics & Heredity
Gabriella Assante, Sriram Chandrasekaran, Stanley Ng, Aikaterini Tourna, Carolina H. Chung, Kowsar A. Isse, Jasmine L. Banks, Ugo Soffientini, Celine Filippi, Anil Dhawan, Mo Liu, Steven G. Rozen, Matthew Hoare, Peter Campbell, J. William O. Ballard, Nigel Turner, Margaret J. Morris, Shilpa Chokshi, Neil A. Youngson
Editorial Material
Genetics & Heredity
Dmytro V. Gospodaryov, J. William O. Ballard, M. Florencia Camus, Rob DeSalle, Michael R. Garvin, Uwe Richter
FRONTIERS IN GENETICS
(2023)
Article
Ornithology
Michael F. Braby, David K. Yeates, Leo Joseph
Summary: The decline of woodland birds globally is well-known, and likely caused by multiple factors such as habitat fragmentation and the invasion of exotic species. Similarly, declines in insect populations have been observed worldwide in recent years, especially in areas of intensive agriculture or urbanization. Considering that many woodland birds rely on insects for food, it is important to investigate whether the loss of food resources is also contributing to bird declines. Further research in this area is encouraged.
EMU-AUSTRAL ORNITHOLOGY
(2023)
Article
Biology
J. William O. Ballard, Matt A. Field, Richard J. Edwards, Laura A. B. Wilson, Loukas G. Koungoulos, Benjamin D. Rosen, Barry Chernoff, Olga Dudchenko, Arina Omer, Jens Keilwagen, Ksenia Skvortsova, Ozren Bogdanovic, Eva Chan, Robert Zammit, Vanessa Hayes, Erez Lieberman Aiden
Summary: We describe a female Alpine dingo named Cooinda, who has been identified as a representative specimen for future research on the evolutionary history, morphology, physiology, and ecology of dingoes. The study provides evidence that Cooinda exhibits genetic and morphological characteristics typical of the Alpine ecotype.
Meeting Abstract
Gastroenterology & Hepatology
G. Assante, S. Chandrasekaran, S. Ng, A. Tourna, C. Chung, K. Isse, J. Banks, U. Soffientini, C. Filippi, A. Dhawan, M. Liu, S. Rozen, M. Hoare, P. Campbell, W. Ballard, N. Turner, M. Morris, S. Chokshi, N. Youngson
JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY
(2022)