标题
Profiling RNA editing in human tissues: towards the inosinome Atlas
作者
关键词
-
出版物
Scientific Reports
Volume 5, Issue -, Pages 14941
出版商
Springer Nature
发表日期
2015-10-09
DOI
10.1038/srep14941
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- DREAM: a webserver for the identification of editing sites in mature miRNAs using deep sequencing data
- (2015) Shahar Alon et al. BIOINFORMATICS
- Genome sequence–independent identification of RNA editing sites
- (2015) Qing Zhang et al. NATURE METHODS
- The human transcriptome across tissues and individuals
- (2015) M. Mele et al. SCIENCE
- The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
- (2015) et al. SCIENCE
- Genomic analysis of ADAR1 binding and its involvement in multiple RNA processing pathways
- (2015) Jae Hoon Bahn et al. Nature Communications
- DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes
- (2015) J. Pinero et al. Database-The Journal of Biological Databases and Curation
- Profiling the RNA editomes of wild-typeC. elegansand ADAR mutants
- (2014) Han-Qing Zhao et al. GENOME RESEARCH
- Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior
- (2014) Qiye Li et al. Nature Communications
- A genome-wide map of hyper-edited RNA reveals numerous new sites
- (2014) Hagit T. Porath et al. Nature Communications
- RNA Editome in Rhesus Macaque Shaped by Purifying Selection
- (2014) Jia-Yu Chen et al. PLoS Genetics
- Mammalian conserved ADAR targets comprise only a small fragment of the human editosome
- (2014) Yishay Pinto et al. GENOME BIOLOGY
- REDItools: high-throughput RNA editing detection made easy
- (2013) Ernesto Picardi et al. BIOINFORMATICS
- A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes
- (2013) L. Bazak et al. GENOME RESEARCH
- Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics
- (2013) Linn Fagerberg et al. MOLECULAR & CELLULAR PROTEOMICS
- The Genotype-Tissue Expression (GTEx) project
- (2013) John Lonsdale et al. NATURE GENETICS
- Identifying RNA editing sites using RNA sequencing data alone
- (2013) Gokul Ramaswami et al. NATURE METHODS
- Genome-wide analysis of A-to-I RNA editing by single-molecule sequencing in Drosophila
- (2013) Georges St Laurent et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements: Table 1.
- (2013) Hao Luo et al. NUCLEIC ACIDS RESEARCH
- RADAR: a rigorously annotated database of A-to-I RNA editing
- (2013) Gokul Ramaswami et al. NUCLEIC ACIDS RESEARCH
- Characterization and comparison of human nuclear and cytosolic editomes
- (2013) L. Chen PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression
- (2013) Isabel X. Wang et al. Cell Reports
- Systematic identification of edited microRNAs in the human brain
- (2012) S. Alon et al. GENOME RESEARCH
- Nascent-Seq Indicates Widespread Cotranscriptional RNA Editing in Drosophila
- (2012) Joseph Rodriguez et al. MOLECULAR CELL
- Landscape of transcription in human cells
- (2012) Sarah Djebali et al. NATURE
- Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome
- (2012) Zhiyu Peng et al. NATURE BIOTECHNOLOGY
- The difficult calls in RNA editing
- (2012) Brenda Bass et al. NATURE BIOTECHNOLOGY
- Differential analysis of gene regulation at transcript resolution with RNA-seq
- (2012) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Accurate identification of human Alu and non-Alu RNA editing sites
- (2012) Gokul Ramaswami et al. NATURE METHODS
- Darned in 2013: inclusion of model organisms and linking with Wikipedia
- (2012) Anmol M. Kiran et al. NUCLEIC ACIDS RESEARCH
- A Novel Computational Strategy to Identify A-to-I RNA Editing Sites by RNA-Seq Data: De Novo Detection in Human Spinal Cord Tissue
- (2012) Ernesto Picardi et al. PLoS One
- Transcriptome-wide identification of A > I RNA editing sites by inosine specific cleavage
- (2012) P. B. Cattenoz et al. RNA
- RNA editing of protein sequences: A rare event in human transcriptomes
- (2012) C. L. Kleinman et al. RNA
- Identification of novel transcripts in annotated genomes using RNA-Seq
- (2011) A. Roberts et al. BIOINFORMATICS
- ADARs: allies or enemies? The importance of A-to-I RNA editing in human disease: from cancer to HIV-1
- (2011) Angela Gallo et al. BIOLOGICAL REVIEWS
- Accurate identification of A-to-I RNA editing in human by transcriptome sequencing
- (2011) J. H. Bahn et al. GENOME RESEARCH
- Deregulation of the A-to-I RNA editing mechanism in psychiatric disorders
- (2011) Gilad Silberberg et al. HUMAN MOLECULAR GENETICS
- Defining the Role of Essential Genes in Human Disease
- (2011) Jonathan E. Dickerson et al. PLoS One
- Adenosine deaminases acting on RNA (ADARs) are both antiviral and proviral
- (2011) Charles E. Samuel VIROLOGY
- Alu elements: know the SINEs
- (2011) Prescott Deininger GENOME BIOLOGY
- Functions and Regulation of RNA Editing by ADAR Deaminases
- (2010) Kazuko Nishikura Annual Review of Biochemistry
- Fast and SNP-tolerant detection of complex variants and splicing in short reads
- (2010) T. D. Wu et al. BIOINFORMATICS
- Cross-mapping and the identification of editing sites in mature microRNAs in high-throughput sequencing libraries
- (2010) M. J.L. de Hoon et al. GENOME RESEARCH
- ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
- (2010) K. Wang et al. NUCLEIC ACIDS RESEARCH
- APOBEC-1-mediated RNA editing
- (2010) Valerie Blanc et al. Wiley Interdisciplinary Reviews-Systems Biology and Medicine
- Pseudogene-mediated posttranscriptional silencing of HMGA1 can result in insulin resistance and type 2 diabetes
- (2010) Eusebio Chiefari et al. Nature Communications
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Genome-Wide Identification of Human RNA Editing Sites by Parallel DNA Capturing and Sequencing
- (2009) J. B. Li et al. SCIENCE
- Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes
- (2008) Oliver H. Tam et al. NATURE
- Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
- (2008) Da Wei Huang et al. NUCLEIC ACIDS RESEARCH
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started