Comparative genomic and transcriptional analyses of the carbohydrate-active enzymes and secretomes of phytopathogenic fungi reveal their significant roles during infection and development

FungiFun2: a comprehensive online resource for systematic analysis of gene lists from fungal species

(2014) S. Priebe et al.   BIOINFORMATICS

Secretome analysis reveals effector candidates associated with broad host range necrotrophy in the fungal plant pathogen Sclerotinia sclerotiorum

(2014) Koanna Guyon et al.   BMC GENOMICS

INVEX—a web-based tool for integrative visualization of expression data

(2013) Jianguo Xia et al.   BIOINFORMATICS

Novel Secretory Protein Ss-Caf1 of the Plant-Pathogenic FungusSclerotinia sclerotiorumIs Required for Host Penetration and Normal Sclerotial Development

(2013) Xueqiong Xiao et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

A Secretory Protein of Necrotrophic Fungus Sclerotinia sclerotiorum That Suppresses Host Resistance

(2013) Wenjun Zhu et al.   PLoS One

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

Ss-Sl2, a Novel Cell Wall Protein with PAN Modules, Is Essential for Sclerotial Development and Cellular Integrity of Sclerotinia sclerotiorum

(2012) Yang Yu et al.   PLoS One

Sequential Delivery of Host-Induced Virulence Effectors by Appressoria and Intracellular Hyphae of the Phytopathogen Colletotrichum higginsianum

(2012) Jochen Kleemann et al.   PLoS Pathogens

The Cysteine Rich Necrotrophic Effector SnTox1 Produced by Stagonospora nodorum Triggers Susceptibility of Wheat Lines Harboring Snn1

(2012) Zhaohui Liu et al.   PLoS Pathogens

Melampsora larici-populina Transcript Profiling During Germination and Timecourse Infection of Poplar Leaves Reveals Dynamic Expression Patterns Associated with Virulence and Biotrophy

(2011) Sébastien Duplessis et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

(2011) S. Duplessis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

NMR solution structure of a cyanovirin homolog from wheat head blight fungus

(2011) Elena Matei et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea

(2011) Joelle Amselem et al.   PLoS Genetics

The CAZyome of Phytophthora spp.: A comprehensive analysis of the gene complement coding for carbohydrate-active enzymes in species of the genus Phytophthora

(2010) Manuel D Ospina-Giraldo et al.   BMC GENOMICS

CAZymes Analysis Toolkit (CAT): Web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database

(2010) Byung H Park et al.   GLYCOBIOLOGY

Plant Cell Walls

(2010) K. Keegstra   PLANT PHYSIOLOGY

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

(2010) P. D. Spanu et al.   SCIENCE

Fungal Effector Proteins

(2009) Ioannis Stergiopoulos et al.   Annual Review of Phytopathology

The structure, function, and biosynthesis of plant cell wall pectic polysaccharides

(2009) Kerry Hosmer Caffall et al.   CARBOHYDRATE RESEARCH

Fungal effector proteins: past, present and future

(2009) PIERRE J. G. M. DE WIT et al.   MOLECULAR PLANT PATHOLOGY

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Contribution of cell wall degrading enzymes to pathogenesis ofFusarium graminearum: a review

(2008) Gisele Eleonora Kikot et al.   JOURNAL OF BASIC MICROBIOLOGY

Systematic functional analysis of calcium-signalling proteins in the genome of the rice-blast fungus,Magnaporthe oryzae, using a high-throughput RNA-silencing system

(2008) Quoc Bao Nguyen et al.   MOLECULAR MICROBIOLOGY

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

(2008) Peter A. C. 't Hoen et al.   NUCLEIC ACIDS RESEARCH

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH

The Evolutionarily Conserved Family of Cyanovirin-N Homologs: Structures and Carbohydrate Specificity

(2008) Leonardus M.I. Koharudin et al.   STRUCTURE