Systematic Analysis of Challenge-Driven Improvements in Molecular Prognostic Models for Breast Cancer

Systematic Review: Gene Expression Profiling Assays in Early-Stage Breast Cancer

(2013) Luigi Marchionni et al.   ANNALS OF INTERNAL MEDICINE

A large-scale evaluation of computational protein function prediction

(2013) Predrag Radivojac et al.   NATURE METHODS

Development of a Prognostic Model for Breast Cancer Survival in an Open Challenge Environment

(2013) W.-Y. Cheng et al.   Science Translational Medicine

Improving Breast Cancer Survival Analysis through Competition-Based Multidimensional Modeling

(2013) Erhan Bilal et al.   PLoS Computational Biology

Global estimates of cancer prevalence for 27 sites in the adult population in 2008

(2012) Freddie Bray et al.   INTERNATIONAL JOURNAL OF CANCER

Developing predictive molecular maps of human disease through community-based modeling

(2012) Jonathan M J Derry et al.   NATURE GENETICS

Wisdom of crowds for robust gene network inference

(2012) Daniel Marbach et al.   NATURE METHODS

The EORTC 10041/BIG 03-04 MINDACT trial is feasible: Results of the pilot phase

(2011) Emiel Rutgers et al.   EUROPEAN JOURNAL OF CANCER

The self-assessment trap: can we all be better than average?

(2011) R. Norel et al.   Molecular Systems Biology

May the Best Analyst Win

(2011) J. Carpenter   SCIENCE

Crowdsourcing Network Inference: The DREAM Predictive Signaling Network Challenge

(2011) R. J. Prill et al.   Science Signaling

Supervised normalization of microarrays

(2010) Brigham H. Mecham et al.   BIOINFORMATICS

Trastuzumab

(2010) Karly P. Garnock-Jones et al.   DRUGS

Predicting protein structures with a multiplayer online game

(2010) Seth Cooper et al.   NATURE

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

(2010)   NATURE BIOTECHNOLOGY

The Archon Genomics X PRIZE for whole human genome sequencing

(2010) Larry Kedes et al.   NATURE GENETICS

Towards a Rigorous Assessment of Systems Biology Models: The DREAM3 Challenges

(2010) Robert J. Prill et al.   PLoS One

Revealing strengths and weaknesses of methods for gene network inference

(2010) D. Marbach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lessons from the DREAM2 Challenges

(2009) Gustavo Stolovitzky et al.   Annals of the New York Academy of Sciences

Supervised Risk Predictor of Breast Cancer Based on Intrinsic Subtypes

(2009) Joel S. Parker et al.   JOURNAL OF CLINICAL ONCOLOGY

Random survival forests

(2008) Hemant Ishwaran et al.   Annals of Applied Statistics