Chromosomal organization of centromeric Ty3/gypsy retrotransposons in Allium cepa L. and Allium fistulosum L.

Young, intact and nested retrotransposons are abundant in the onion and asparagus genomes

(2013) C. Vitte et al.   ANNALS OF BOTANY

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads

(2013) P. Novak et al.   BIOINFORMATICS

Assembly and comparative analysis of transposable elements from low coverage genomic sequence data in Asparagales

(2013) Kate L. Hertweck   GENOME

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

(2013) Daniël P Melters et al.   GENOME BIOLOGY

Retrotransposon insertion targeting: a mechanism for homogenization of centromere sequences on nonhomologous chromosomes

(2012) J. A. Birchler et al.   GENES & DEVELOPMENT

Primer3—new capabilities and interfaces

(2012) Andreas Untergasser et al.   NUCLEIC ACIDS RESEARCH

Wheat centromeric retrotransposons: the new ones take a major role in centromeric structure

(2012) Baochun Li et al.   PLANT JOURNAL

Plant centromeric retrotransposons: a structural and cytogenetic perspective

(2011) Pavel Neumann et al.   Mobile DNA

Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison

(2010) Jianchang Du et al.   PLANT JOURNAL

Nested Ty3-gypsy retrotransposons of a single Beta procumbens centromere contain a putative chromodomain

(2009) Beatrice Weber et al.   CHROMOSOME RESEARCH

Structure and dynamics of retrotransposons at wheat centromeres and pericentromeres

(2008) Zhao Liu et al.   CHROMOSOMA

Repetitive DNA and chromosomal rearrangements: speciation-related events in plant genomes

(2008) O. Raskina et al.   CYTOGENETIC AND GENOME RESEARCH

Pilot sequencing of onion genomic DNA reveals fragments of transposable elements, low gene densities, and significant gene enrichment after methyl filtration

(2008) Jernej Jakše et al.   MOLECULAR GENETICS AND GENOMICS