Function of PPR proteins in plastid gene expression

Redox Regulation of Thylakoid Protein Kinases and Photosynthetic Gene Expression

(2013) Jean-David Rochaix   ANTIOXIDANTS & REDOX SIGNALING

RNA PROCESSING FACTOR 5 is required for efficient 5′ cleavage at a processing site conserved in RNAs of three different mitochondrial genes inArabidopsis thaliana

(2013) Aron Hauler et al.   PLANT JOURNAL

The E domains of pentatricopeptide repeat proteins from different organelles are not functionally equivalent for RNA editing

(2013) Anne-Laure Chateigner-Boutin et al.   PLANT JOURNAL

MEF10 is required for RNA editing at nad2-842 in mitochondria of Arabidopsis thaliana and interacts with MORF8

(2013) Barbara Härtel et al.   PLANT MOLECULAR BIOLOGY

Elucidation of the RNA Recognition Code for Pentatricopeptide Repeat Proteins Involved in Organelle RNA Editing in Plants

(2013) Yusuke Yagi et al.   PLoS One

An RNA recognition motif-containing protein is required for plastid RNA editing in Arabidopsis and maize

(2013) T. Sun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural insights into protein-only RNase P complexed with tRNA

(2013) Anthony Gobert et al.   Nature Communications

A pentatricopeptide repeat protein acts as a site-specificity factor at multiple RNA editing sites with unrelated cis -acting elements in plastids

(2012) Kenji Okuda et al.   NUCLEIC ACIDS RESEARCH

Mechanistic Insight into Pentatricopeptide Repeat Proteins as Sequence-Specific RNA-Binding Proteins for Organellar RNAs in Plants

(2012) T. Nakamura et al.   PLANT AND CELL PHYSIOLOGY

Two Interacting Proteins Are Necessary for the Editing of the NdhD-1 Site in Arabidopsis Plastids

(2012) C. Boussardon et al.   PLANT CELL

The pentatricopeptide repeat-SMR protein ATP4 promotes translation of the chloroplastatpB/EmRNA

(2012) Reimo Zoschke et al.   PLANT JOURNAL

Composition and physiological function of the chloroplast NADH dehydrogenase-like complex inMarchantia polymorpha

(2012) Minoru Ueda et al.   PLANT JOURNAL

Steady-State Phosphorylation of Light-Harvesting Complex II Proteins Preserves Photosystem I under Fluctuating White Light

(2012) M. Grieco et al.   PLANT PHYSIOLOGY

Mitochondrial ribonuclease P structure provides insight into the evolution of catalytic strategies for precursor-tRNA 5' processing

(2012) M. J. Howard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing

(2012) S. Bentolila et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants

(2012) M. Takenaka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A short PPR protein required for the splicing of specific group II introns in angiosperm chloroplasts

(2012) A. Khrouchtchova et al.   RNA

A Combinatorial Amino Acid Code for RNA Recognition by Pentatricopeptide Repeat Proteins

(2012) Alice Barkan et al.   PLoS Genetics

RNA editing in plant organelles. Why make it easy?

(2011) B. Castandet et al.   BIOCHEMISTRY-MOSCOW

Pentatricopeptide Repeat Proteins Constrain Genome Evolution in Chloroplasts

(2011) Michael L. Hayes et al.   MOLECULAR BIOLOGY AND EVOLUTION

Structure of human mitochondrial RNA polymerase

(2011) Rieke Ringel et al.   NATURE

The evolution of RNA editing and pentatricopeptide repeat genes

(2011) Sota Fujii et al.   NEW PHYTOLOGIST

Protein-mediated protection as the predominant mechanism for defining processed mRNA termini in land plant chloroplasts

(2011) Petya Zhelyazkova et al.   NUCLEIC ACIDS RESEARCH

Short non-coding RNA fragments accumulating in chloroplasts: footprints of RNA binding proteins?

(2011) Hannes Ruwe et al.   NUCLEIC ACIDS RESEARCH

Identification and characterization of the RNA binding surface of the pentatricopeptide repeat protein

(2011) Keiko Kobayashi et al.   NUCLEIC ACIDS RESEARCH

The Nucleus-Encodedtrans-Acting Factor MCA1 Plays a Critical Role in the Regulation of CytochromefSynthesis inChlamydomonasChloroplasts

(2011) Alix Boulouis et al.   PLANT CELL

PROTON GRADIENT REGULATION 3 recognizes multiple targets with limited similarity and mediates translation and RNA stabilization in plastids

(2011) Wenhe Cai et al.   PLANT JOURNAL

A PPR-DYW protein is required for splicing of a group II intron of cox1 pre-mRNA in Physcomitrella patens

(2011) Mizuho Ichinose et al.   PLANT JOURNAL

Supercomplex Formation with Photosystem I Is Required for the Stabilization of the Chloroplast NADH Dehydrogenase-Like Complex in Arabidopsis

(2011) L. Peng et al.   PLANT PHYSIOLOGY

RNA PROCESSING FACTOR3 Is Crucial for the Accumulation of Mature ccmC Transcripts in Mitochondria of Arabidopsis Accession Columbia

(2011) C. Jonietz et al.   PLANT PHYSIOLOGY

Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution

(2011) S. Fujii et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PPR proteins network as site-specific RNA editing factors in plant organelles

(2011) Anja Zehrmann et al.   RNA Biology

Chloroplast RNA Metabolism

(2010) David B. Stern et al.   Annual Review of Plant Biology

The developmental dynamics of the maize leaf transcriptome

(2010) Pinghua Li et al.   NATURE GENETICS

MRL1, a Conserved Pentatricopeptide Repeat Protein, Is Required for Stabilization of rbcL mRNA in Chlamydomonas and Arabidopsis

(2010) X. Johnson et al.   PLANT CELL

Physiological links among alternative electron transport pathways that reduce and oxidize plastoquinone in Arabidopsis

(2010) Yuki Okegawa et al.   PLANT JOURNAL

The SLO1 PPR protein is required for RNA editing at multiple sites with similar upstream sequences in Arabidopsis mitochondria

(2010) Tzu-Ying Sung et al.   PLANT JOURNAL

An Arabidopsis Pentatricopeptide Repeat Protein, SUPPRESSOR OF VARIEGATION7, Is Required for FtsH-Mediated Chloroplast Biogenesis

(2010) X. Liu et al.   PLANT PHYSIOLOGY

Mechanism of RNA stabilization and translational activation by a pentatricopeptide repeat protein

(2010) J. Prikryl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Site-specific binding of a PPR protein defines and stabilizes 5′ and 3′ mRNA termini in chloroplasts

(2009) Jeannette Pfalz et al.   EMBO JOURNAL

Pentatricopeptide Repeat Proteins with the DYW Motif Have Distinct Molecular Functions in RNA Editing and RNA Cleavage in Arabidopsis Chloroplasts

(2009) K. Okuda et al.   PLANT CELL

Efficient Operation of NAD(P)H Dehydrogenase Requires Supercomplex Formation with Photosystem I via Minor LHCI in Arabidopsis

(2009) L. Peng et al.   PLANT CELL

A Study of New Arabidopsis Chloroplast RNA Editing Mutants Reveals General Features of Editing Factors and Their Target Sites

(2009) K. Hammani et al.   PLANT CELL

The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts

(2009) Kenji Okuda et al.   PLANT JOURNAL

Thylakoid Protein Phosphorylation in Higher Plant Chloroplasts Optimizes Electron Transfer under Fluctuating Light

(2009) M. Tikkanen et al.   PLANT PHYSIOLOGY

Chloroplast ribonucleoprotein CP31A is required for editing and stability of specific chloroplast mRNAs

(2009) M. Tillich et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors

(2009) J. Boch et al.   SCIENCE

A Simple Cipher Governs DNA Recognition by TAL Effectors

(2009) M. J. Moscou et al.   SCIENCE

Complex chloroplast RNA metabolism: just debugging the genetic programme?

(2008) Uwe G Maier et al.   BMC BIOLOGY

A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity

(2008) Takahiro Nakamura et al.   FEBS LETTERS

On the Expansion of the Pentatricopeptide Repeat Gene Family in Plants

(2008) N. O'Toole et al.   MOLECULAR BIOLOGY AND EVOLUTION

Amino acid sequence variations in Nicotiana CRR4 orthologs determine the species-specific efficiency of RNA editing in plastids

(2008) Kenji Okuda et al.   NUCLEIC ACIDS RESEARCH

CLB19, a pentatricopeptide repeat protein required for editing ofrpoAandclpPchloroplast transcripts

(2008) Anne-Laure Chateigner-Boutin et al.   PLANT JOURNAL

The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth

(2008) Wenbin Zhou et al.   PLANT JOURNAL

Sequence-specific binding of a chloroplast pentatricopeptide repeat protein to its native group II intron ligand

(2008) R. Williams-Carrier et al.   RNA

Pentatricopeptide repeat proteins: a socket set for organelle gene expression

(2008) C SCHMITZLINNEWEBER et al.   TRENDS IN PLANT SCIENCE