标题
Blind prediction of interfacial water positions in CAPRI
作者
关键词
-
出版物
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume 82, Issue 4, Pages 620-632
出版商
Wiley
发表日期
2013-10-24
DOI
10.1002/prot.24439
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit
- (2013) Sander Pronk et al. BIOINFORMATICS
- Solvated protein-protein docking using Kyte-Doolittle-based water preferences
- (2013) Panagiotis L. Kastritis et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions
- (2013) Rocco Moretti et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Structure of the Ultra-High-Affinity Colicin E2 DNase–Im2 Complex
- (2012) Justyna Aleksandra Wojdyla et al. JOURNAL OF MOLECULAR BIOLOGY
- Rapid and Accurate Prediction and Scoring of Water Molecules in Protein Binding Sites
- (2012) Gregory A. Ross et al. PLoS One
- Water in the orchestration of the cell machinery. Some misunderstandings: a short review
- (2011) Pascale Mentré JOURNAL OF BIOLOGICAL PHYSICS
- Probing the Dynamic Nature of Water Molecules and Their Influences on Ligand Binding in a Model Binding Site
- (2011) Daniel Cappel et al. Journal of Chemical Information and Modeling
- AcquaAlta: A Directional Approach to the Solvation of Ligand–Protein Complexes
- (2011) Gianluca Rossato et al. Journal of Chemical Information and Modeling
- A Force Field with Discrete Displaceable Waters and Desolvation Entropy for Hydrated Ligand Docking
- (2011) Stefano Forli et al. JOURNAL OF MEDICINAL CHEMISTRY
- Community-Wide Assessment of Protein-Interface Modeling Suggests Improvements to Design Methodology
- (2011) Sarel J. Fleishman et al. JOURNAL OF MOLECULAR BIOLOGY
- Ligand binding to protein-binding pockets with wet and dry regions
- (2011) L. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Systematic placement of structural water molecules for improved scoring of protein-ligand interactions
- (2011) D. J. Huggins et al. PROTEIN ENGINEERING DESIGN & SELECTION
- Structure-guided forcefield optimization
- (2011) Yifan Song et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Adhesive water networks facilitate binding of protein interfaces
- (2011) Mazen Ahmad et al. Nature Communications
- Accounting for conformational changes during protein–protein docking
- (2010) Martin Zacharias CURRENT OPINION IN STRUCTURAL BIOLOGY
- Protein–protein docking tested in blind predictions: the CAPRI experiment
- (2010) Joël Janin Molecular BioSystems
- The structural and energetic basis for high selectivity in a high-affinity protein-protein interaction
- (2010) N. A. G. Meenan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Docking and scoring protein interactions: CAPRI 2009
- (2010) Marc F. Lensink et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Transient Protein-Protein Interactions: Structural, Functional, and Network Properties
- (2010) James R. Perkins et al. STRUCTURE
- CHARMM: The biomolecular simulation program
- (2009) B. R. Brooks et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- Protein Hydration Dynamics and Molecular Mechanism of Coupled Water−Protein Fluctuations
- (2009) Luyuan Zhang et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Recent Progress and Future Directions in Protein-Protein Docking
- (2008) David Ritchie CURRENT PROTEIN & PEPTIDE SCIENCE
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