Prots: A fragment based protein thermo-stability potential

Distance-dependent statistical potentials for discriminating thermophilic and mesophilic proteins

(2010) Yunqi Li et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants

(2010) Yunqi Li et al.   BMC BIOINFORMATICS

Reliable prediction of protein thermostability change upon double mutation from amino acid sequence

(2009) Liang-Tsung Huang et al.   BIOINFORMATICS

Comparative proteome analysis of psychrophilic versus mesophilic bacterial species: Insights into the molecular basis of cold adaptation of proteins

(2009) Raghu Metpally et al.   BMC GENOMICS

Protein structure prediction: when is it useful?

(2009) Yang Zhang   CURRENT OPINION IN STRUCTURAL BIOLOGY

Sequence-Based Analysis of Protein Energy Landscapes Reveals Nonuniform Thermal Adaptation within the Proteome

(2009) J. Gu et al.   MOLECULAR BIOLOGY AND EVOLUTION

Design of therapeutic proteins with enhanced stability

(2009) N. Chennamsetty et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details

(2009) V. Potapov et al.   PROTEIN ENGINEERING DESIGN & SELECTION

Protein structure prediction center in CASP8

(2009) Andriy Kryshtafovych et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

REMO: A new protocol to refine full atomic protein models from C-alpha traces by optimizing hydrogen-bonding networks

(2009) Yunqi Li et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

I-TASSER: Fully automated protein structure prediction in CASP8

(2009) Yang Zhang   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Predicting protein thermostability changes from sequence upon multiple mutations

(2008) L. Montanucci et al.   BIOINFORMATICS

Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis

(2008) M. Masso et al.   BIOINFORMATICS

I-TASSER server for protein 3D structure prediction

(2008) Yang Zhang   BMC BIOINFORMATICS

An expert system to predict protein thermostability using decision tree

(2008) Li-Cheng Wu et al.   EXPERT SYSTEMS WITH APPLICATIONS

Bioinformatic method for protein thermal stabilization by structural entropy optimization

(2008) E. Bae et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Predicting the Energetics of Conformational Fluctuations in Proteins from Sequence: A Strategy for Profiling the Proteome

(2008) Jenny Gu et al.   STRUCTURE

Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a β-trefoil

(2002) Stephen R. Brych et al.   PROTEIN SCIENCE

Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction

(2002) Hongyi Zhou et al.   PROTEIN SCIENCE