Antibody i-Patch prediction of the antibody binding site improves rigid local antibody-antigen docking

Application of asymmetric statistical potentials to antibody-protein docking

(2012) R. Brenke et al.   BIOINFORMATICS

Protein docking prediction using predicted protein-protein interface

(2012) Bin Li et al.   BMC BIOINFORMATICS

Antigen-binding site anatomy and somatic mutations in antibodies that recognize different types of antigens

(2012) Gopalan Raghunathan et al.   JOURNAL OF MOLECULAR RECOGNITION

Structural Consensus among Antibodies Defines the Antigen Binding Site

(2012) Vered Kunik et al.   PLoS Computational Biology

Predicting antibody complementarity determining region structures without classification

(2011) Yoonjoo Choi et al.   Molecular BioSystems

Accelerating Protein Docking in ZDOCK Using an Advanced 3D Convolution Library

(2011) Brian G. Pierce et al.   PLoS One

i-Patch: Interprotein contact prediction using local network information

(2010) Rebecca Hamer et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

SnugDock: Paratope Structural Optimization during Antibody-Antigen Docking Compensates for Errors in Antibody Homology Models

(2010) Aroop Sircar et al.   PLoS Computational Biology

PIGS: automatic prediction of antibody structures

(2008) P. Marcatili et al.   BIOINFORMATICS

The Intrinsic Contributions of Tyrosine, Serine, Glycine and Arginine to the Affinity and Specificity of Antibodies

(2008) Sara Birtalan et al.   JOURNAL OF MOLECULAR BIOLOGY

The predictive receiver operating characteristic curve for the joint assessment of the positive and negative predictive values

(2008) S.-Y. Shiu et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Toward high-resolution homology modeling of antibody Fvregions and application to antibody-antigen docking

(2008) Arvind Sivasubramanian et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Predicting and Validating Protein Interactions Using Network Structure

(2008) Pao-Yang Chen et al.   PLoS Computational Biology