Article
Microbiology
Carmen Stecher, Sanja Marinkov, Lucia Mayr-Harting, Ana Katic, Marie-Theres Kastner, Franz J. J. Rieder-Rommer, Xionghao Lin, Sergei Nekhai, Christoph Steininger
Summary: In this study, the researchers found that inhibition of PP1 using 1E7-03 severely impaired HCMV replication and viral protein translation, potentially through preventing AMP-activated protein kinase dephosphorylation. This revealed an important mechanism of PP1 for lytic HCMV infection.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Song Song, Bomsoo Cho, Alexis T. Weiner, Silas Boye Nissen, Irene Ojeda Naharros, Pablo Sanchez Bosch, Kaye Suyama, Yanhui Hu, Li He, Tanya Svinkina, Namrata D. Udeshi, Steven A. Carr, Norbert Perrimon, Jeffrey D. Axelrod
Summary: This study identified proteins involved in regulating planar cell polarity (PCP) using mass spectrometry-based proteomics. It was found that the catalytic subunit of protein phosphatase 1 (Pp1-87B) and the regulatory subunit PNUTS are involved in regulating PCP. The results suggest that cycling between phosphorylated and unphosphorylated forms of core PCP components may regulate cell polarity.
Article
Multidisciplinary Sciences
Wenqing Zhou, Lei Zhou, Jordan Zhou, Coco Chu, Chao Zhang, Robbyn E. Sockolow, Gerard Eberl, Gregory F. Sonnenberg
Summary: This study defines ROR gamma t(+) immune cells in the intestine at single-cell resolution and identifies a subset of ILC3s that expresses ZBTB46, a transcription factor shared with conventional dendritic cells. ZBTB46 restrains the inflammatory properties of ILC3s and plays a non-redundant role in orchestrating intestinal health.
Article
Microbiology
Weichao Ren, Yihan Zhang, Meiqi Zhu, Zequn Liu, Sen Lian, Caixia Wang, Baohua Li, Na Liu
Summary: The protein phosphatase complex Nem1/Spo7 plays important roles in the regulation of various biological processes in the phytopathogenic fungus Botryosphaeria dothidea. It interacts with and dephosphorylates the substrate Pah1, promoting lipid droplet synthesis and regulating nuclear membrane morphology. It is also involved in the regulation of mycelial growth, development, stress responses, and virulence in B. dothidea.
MICROBIOLOGY SPECTRUM
(2023)
Article
Reproductive Biology
William C. Lester, Taylor Johnson, Ben Hale, Nicholas Serra, Brian Elgart, Rong Wang, Christopher B. Geyer, Ann O. Sperry
Summary: Aurora A kinase (AURKA) plays multiple important roles in spermatogenesis, involving in mitotic division, affecting sperm count and fertility, and regulating sperm morphology and motility. Deletion of AURKA in spermatogonia and spermatocytes led to different outcomes, highlighting the diverse functions of AURKA in different stages of sperm development.
BIOLOGY OF REPRODUCTION
(2021)
Article
Cell Biology
Kaiqing Zhang, Fabio Da Silva, Carina Seidl, Michaela Wilsch-Braeuninger, Jessica Herbst, Wieland B. Huttner, Christof Niehrs
Summary: WNT signaling plays a crucial role in development, stem cell maintenance, and disease. Researchers have discovered that WNT receptors in the primary cilia transmit a 0-catenin-independent signal, promoting ciliogenesis. This finding provides important insights into the mechanism of WNT signaling.
DEVELOPMENTAL CELL
(2023)
Article
Biochemistry & Molecular Biology
Shaolong Zhang, Jingping Zhou, Pengzhao Shang, Guomeng Zhao, Anlei Wang, Jinlei Mao, Yuhang Tao, Ziyi Chen, Xuehao Wang, Changying Guo
Summary: The study reveals that genetic deletion of SE translocation (SET) inhibits the infiltration of tumor-associated macrophages (TAMs) into hypoxic tumor regions, thereby suppressing their proangiogenic and immunosuppressive functions and ultimately inhibiting tumor growth.
EXPERIMENTAL AND MOLECULAR MEDICINE
(2022)
Review
Immunology
Emma L. Hornick, Gail A. Bishop
Summary: Tumor necrosis factor receptor (TNFR)-associated factor 3 (TRAF3) is an important modulator of T cell signal integration. It plays a significant role in T cell function and differentiation by regulating signaling through the T cell antigen receptor (TCR), costimulatory receptors, and cytokine receptors. Studies have shown that TRAF3-deficient T cells have defects in proliferation, survival, cytokine production, effector responses, memory T cell homeostasis, and regulatory T cell compartment. Recent identification of TRAF3 mutations in humans further supports its crucial role in T cell biology.
FRONTIERS IN IMMUNOLOGY
(2023)
Article
Endocrinology & Metabolism
Yijun Lin, Meijuan Bai, Shuo Wang, Lingling Chen, Zixuan Li, Chenchen Li, Peijuan Cao, Yan Chen
Summary: This study identifies lactate as a key trigger for obesity-induced inflammation and systemic insulin resistance. Accumulation of lactate in adipocytes leads to apoptosis and release of cytokines, which initiates inflammation and insulin resistance.
Article
Biology
Talang Wang, Ruoyu Zhao, Junhong Zhi, Ziling Liu, Aiwei Wu, Zimei Yang, Weixu Wang, Ting Ni, Lili Jing, Ming Yu
Summary: Tox4 protein is a regulator of PP1 phosphatases with unknown function in development. In mice, conditional knockout of Tox4 reduces thymic cellularity, partially blocks T cell development, and decreases the ratio of CD8 to CD4 cells. Tox4 loss also impairs proliferation of the fast-proliferating DP blast population within DP cells through downregulation of genes critical for proliferation, and genes with high and low expression level are more dependent on Tox4. Mechanistically, Tox4 may facilitate transcriptional reinitiation and restrict elongation in a dephosphorylation-dependent manner, and it is an evolutionarily conserved regulator of transcriptional elongation and reinitiation. Tox4 controls T cell development in mice by regulating transcription of cell cycle regulation genes via PP1 phosphatases, independent of chromatin accessibility modulation.
COMMUNICATIONS BIOLOGY
(2023)
Article
Biochemistry & Molecular Biology
Yan-Yan Zheng, Ye Wang, Xin Chen, Li-Sha Wei, Han Wang, Tao Tao, Yu-Wei Zhou, Zhi-Hui Jiang, Tian-Tian Qiu, Zhi-Yuan Sun, Jie Sun, Pei Wang, Wei Zhao, Ye-Qiong Li, Hua-Qun Chen, Min-Sheng Zhu, Xue-Na Zhang
Summary: The thymus is essential for skeletal muscle regeneration by promoting satellite cell expansion and may profoundly affect the muscle aging process.
JOURNAL OF BIOLOGICAL CHEMISTRY
(2022)
Article
Immunology
Zhilin Peng, Yiwen Zhang, Xiancai Ma, Mo Zhou, Shiyu Wu, Zheng Song, Yaochang Yuan, Yingshi Chen, Yuzhuang Li, Guanwen Wang, Feng Huang, Yidan Qiao, Baijing Xia, Weiwei Liu, Jun Liu, Xu Zhang, Xin He, Ting Pan, Hanshi Xu, Hui Zhang
Summary: The study highlights the significant role of Brd4 in regulating glucose metabolism and maintaining receptor expression in CD8(+) T cells' homeostasis and immune response.
FRONTIERS IN IMMUNOLOGY
(2021)
Article
Multidisciplinary Sciences
Maxim Katsenelson, Ilana Shapira, Eman Abbas, Kristina Jevdokimenko, Boaz Styr, Antonella Ruggiero, Saba Aid, Eugenio F. Fornasiero, Martin Holzenberger, Silvio O. Rizzoli, Inna Slutsky
Summary: This study reveals that insulin-like growth factor-1 receptor (IGF-1R) is a key regulator of firing rate homeostasis in central neural circuits. At the cellular level, IGF-1R interacts with the mitochondrial calcium uniporter complex (MCUc) and modulates the reliability of burst transfer, thereby affecting firing rate homeostasis.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2022)
Article
Multidisciplinary Sciences
En Cai, Casey Beppler, John Eichorst, Kyle Marchuk, Scott W. Eastman, Matthew F. Krummel
Summary: This study demonstrates the randomness of receptor patch localization within the membrane and on microvillar projections prior to antigen detection, which may play a role in the generation of multiple individually composed receptor patch compositions at a single synapse.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2022)
Article
Immunology
Nadia S. Kurd, Ashley Hoover, Jaewon Yoon, Brian M. Weist, Lydia Lutes, Shiao Wei Chan, Ellen A. Robey
Summary: Thymocytes bearing high-affinity TCRs for self-peptide-MHC complexes undergo negative selection or are diverted to alternate T cell lineages, such as CD8 alpha alpha IELs. However, factors influencing the choice between negative selection and CD8 alpha alpha IEL development are largely unknown. Research shows that the affinity threshold for CD8 alpha alpha IEL development is higher than for negative selection, and the impact of peptide presenting cells, cytokines, and migration patterns on cell fate is significant.
MUCOSAL IMMUNOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Ni Zeng, Christophe M. Capelle, Alexandre Baron, Takumi Kobayashi, Severine Cire, Vera Tslaf, Cathy Leonard, Djalil Coowar, Haruhiko Koseki, Astrid M. Westendorf, Jan Buer, Dirk Brenner, Rejko Krueger, Rudi Balling, Markus Ollert, Feng Q. Hefeng
Summary: Loss of DJ-1 gene reduces signs of immune aging, providing a potential target for intervention in immune aging and aging-related diseases.
Article
Biochemistry & Molecular Biology
Andrea Stofkova, Miloslav Zloh, Dominika Andreanska, Ivana Fiserova, Jan Kubovciak, Jan Hejda, Patrik Kutilek, Masaaki Murakami
Summary: This study demonstrates that the dysfunction of rod photoreceptors leads to the development of autoimmune uveitis. Dopamine mediates the control of immune cell entry into the retina by inhibiting NF-kappa B and STAT3 activity and the expression of chemokines involved in T cell recruitment.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Immunology
Rie Hasebe, Kaoru Murakami, Masaya Harada, Nada Halaka, Hiroshi Nakagawa, Fuminori Kawano, Yoshinobu Ohira, Tadafumi Kawamoto, Fiona E. E. Yull, Timothy S. S. Blackwell, Junko Nio-Kobayashi, Toshihiko Iwanaga, Masahiko Watanabe, Nobuhiro Watanabe, Harumi Hotta, Toshihide Yamashita, Daisuke Kamimura, Yuki Tanaka, Masaaki Murakami
Summary: Local inflammation is spread to remote positions through sensory neuron-interneuron crosstalk using ATP. This neural pathway, known as the remote inflammation gateway reflex, may serve as a therapeutic target for inflammatory diseases with remote inflammation, such as rheumatoid arthritis.
JOURNAL OF EXPERIMENTAL MEDICINE
(2022)
Article
Rheumatology
Nobuya Abe, Masato Tarumi, Yuichiro Fujieda, Nobuhiko Takahashi, Kohei Karino, Mona Uchida, Michihito Kono, Yuki Tanaka, Rie Hasebe, Masaru Kato, Olga Amengual, Yoshiyuki Arinuma, Kenji Oku, Wakiro Sato, Khin Khin Tha, Miwako Yamasaki, Masahiko Watanabe, Tatsuya Atsumi, Masaaki Murakami
Summary: The study investigates the effects of stress on the pathophysiology of neuropsychiatric lupus (NPSLE) in systemic lupus erythematosus (SLE) using lupus-prone mice and patient data.
ANNALS OF THE RHEUMATIC DISEASES
(2022)
Article
Biochemistry & Molecular Biology
Miloslav Zloh, Patrik Kutilek, Andrea Stofkova
Summary: This study found that high-contrast stimulation activates the neurotrophic and neuroprotective properties of Muller cells, promoting retinal regeneration and visual function. These findings provide important clues for understanding the mechanism of retinal plasticity.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Multidisciplinary Sciences
Mengwen Hu, Yu-Han Yeh, Yasuhisa Munakata, Hironori Abe, Akihiko Sakashita, So Maezawa, Miguel Vidal, Haruhiko Koseki, Neil Hunter, Richard M. Schultz, Satoshi H. Namekawa
Summary: The Polycomb Repressive Complex 1 (PRC1) is crucial for the formation and maintenance of the ovarian reserve, which is essential for the female reproductive lifespan. Through establishing repressive chromatin states, PRC1 suppresses the gene expression program of meiotic prophase-I, enabling the transition to dictyate arrest and preventing the depletion of the ovarian reserve.
NATURE COMMUNICATIONS
(2022)
Article
Environmental Sciences
Hisayo Tsuchiya, Mikio Shimada, Kaima Tsukada, Qingmei Meng, Junya Kobayashi, Yoshihisa Matsumoto
Summary: It is commonly accepted that the biological effects of ionizing radiation decrease as the dose rate becomes lower. Recent research suggests that the repair of DNA damage through non-homologous end joining (NHEJ) may play a role in this dose-rate effect.
RADIATION PROTECTION DOSIMETRY
(2022)
Article
Biology
Mikio Shimada, Takumi Tokumiya, Tomoko Miyake, Kaima Tsukada, Norie Kanzaki, Hiromi Yanagihara, Junya Kobayashi, Yoshihisa Matsumoto
Summary: In this study, the researchers found that depleting the RAD18 gene in iPSCs and NPCs resulted in a decreased mutation frequency, revealing the function of RAD18 in pluripotent stem cells.
JOURNAL OF RADIATION RESEARCH
(2023)
Review
Pharmacology & Pharmacy
Keiichiroh Akabane, Kaoru Murakami, Masaaki Murakami
Summary: The gateway reflex and IL-6 amplifier are two mechanisms involved in tissue-specific inflammatory diseases dependent on IL-6. The gateway reflex activates specific neural pathways, allowing autoreactive CD4+ T cells to enter specific tissues. The IL-6 amplifier enhances NF-& kappa;B activation in nonimmune cells, facilitating the gateway reflex.
EXPERT OPINION ON THERAPEUTIC TARGETS
(2023)
Article
Cell Biology
Nobuhiro Morishima, Hiromitsu Ogata, Junji Magae, Yoshihiro Ito, Junya Kobayashi
Article
Biology
Rikiya Imamura, Mizuki Saito, Mikio Shimada, Junya Kobayashi, Masamichi Ishiai, Yoshihisa Matsumoto
Summary: APTX, the product of the causative gene for hereditary neurogenerative syndromes, is involved in DNA repair and has enzymatic activity. It physically binds to XRCC1 and XRCC4, suggesting its role in DNA strand break repair. The significance of APTX in double-strand break repair (DSBR) and its interaction with XRCC4 have not been fully understood.
JOURNAL OF RADIATION RESEARCH
(2023)
Article
Biology
Shuhei Uemura, Shoji Maenohara, Kimiko Inoue, Narumi Ogonuki, Shogo Matoba, Atsuo Ogura, Mayuko Kurumizaka, Kazuo Yamagata, Jafar Sharif, Haruhiko Koseki, Koji Ueda, Motoko Unoki, Hiroyuki Sasaki
Summary: In this study, the researchers found that the specific knockout of the Uhrf1 gene in oocytes affects chromosome segregation, cleavage division, and preimplantation viability in mice. Further investigations showed that these phenotypes were associated with cytoplasmic defects and not nuclear defects. Proteomic analysis of the knockout oocytes revealed down-regulation of proteins related to microtubules and disorganization of the cytoplasmic architecture, including mislocalization of mitochondria, endoplasmic reticulum, and maternal complex components.
LIFE SCIENCE ALLIANCE
(2023)
Article
Cell Biology
Fei Qi, Erin Alvi, Minori Ogawa, Junya Kobayashi, Anfeng Mu, Minoru Takata
Summary: The SLFN11 gene is involved in cell fate decision and contains the RNase domain and the helicase/ATPase domain. The contribution of these domains to the chemotherapeutic response is still debated. By expressing a SLFN11 mutant with mutations in critical residues for RNase activity, we found that this mutant still suppressed DNA damage tolerance, destabilized replication forks, and disrupted recruitment of the fork protector RAD51. On the other hand, we confirmed that the helicase domain was essential for accelerating fork degradation. The fork degradation caused by the RNase mutant depended on DNA2 and MRE11 nuclease, but not on the novel interactor FXR1. Collectively, these results indicate that the RNase domain function is dispensable for SLFN11-mediated cell fate decision during replication stress response.
Review
Immunology
Mona Uchida, Reiji Yamamoto, Shiina Matsuyama, Kaoru Murakami, Rie Hasebe, Shintaro Hojyo, Yuki Tanaka, Masaaki Murakami
Summary: This review article discusses the discovery and future directions of gateway reflexes, with a special focus on their role in bioelectronic medicine. Gateway reflexes are neural circuits that maintain homeostasis of the immune system and facilitate immune cell infiltration into the central nervous system. By regulating gateway reflexes, immune cell infiltration can be controlled.
INTERNATIONAL IMMUNOLOGY
(2022)