A tick-borne segmented RNA virus contains genome segments derived from unsegmented viral ancestors

Molecular phylogeography of tick-borne encephalitis virus in central Europe

(2013) M. Weidmann et al.   JOURNAL OF GENERAL VIROLOGY

Powerful Sequence Similarity Search Methods and In-Depth Manual Analyses Can Identify Remote Homologs in Many Apparently "Orphan" Viral Proteins

(2013) D. B. Kuchibhatla et al.   JOURNAL OF VIROLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylodynamic Analysis of the Emergence and Epidemiological Impact of Transmissible Defective Dengue Viruses

(2013) Ruian Ke et al.   PLoS Pathogens

A novel virus genome discovered in an extreme environment suggests recombination between unrelated groups of RNA and DNA viruses

(2012) Geoffrey S Diemer et al.   Biology Direct

Evolutionary dynamics of genome segmentation in multipartite viruses

(2012) J. Iranzo et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Migration of Norway Rats Resulted in the Worldwide Distribution of Seoul Hantavirus Today

(2011) X.-D. Lin et al.   JOURNAL OF VIROLOGY

The Ecology, Genetic Diversity, and Phylogeny of Huaiyangshan Virus in China

(2011) Y.-Z. Zhang et al.   JOURNAL OF VIROLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment

(2011) Michael Remmert et al.   NATURE METHODS

Viral Genome Segmentation Can Result from a Trade-Off between Genetic Content and Particle Stability

(2011) Samuel Ojosnegros et al.   PLoS Genetics

Structure and functionality in flavivirus NS-proteins: Perspectives for drug design

(2009) Michela Bollati et al.   ANTIVIRAL RESEARCH

Isolation of a novel species of flavivirus and a new strain of Culex flavivirus (Flaviviridae) from a natural mosquito population in Uganda

(2009) S. Cook et al.   JOURNAL OF GENERAL VIROLOGY

A Highly Structured, Nuclease-Resistant, Noncoding RNA Produced by Flaviviruses Is Required for Pathogenicity

(2008) Gorben P. Pijlman et al.   Cell Host & Microbe

Four abundant novel transcript genes from Toxocara canis with unrelated coding sequences share untranslated region tracts implicated in the control of gene expression

(2008) Deborah M. Callister et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Correlating viral phenotypes with phylogeny: Accounting for phylogenetic uncertainty

(2007) Joe Parker et al.   INFECTION GENETICS AND EVOLUTION