Aye-aye population genomic analyses highlight an important center of endemism in northern Madagascar

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

Estimates of Genetic Differentiation Measured by FST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers

(2012) Eva-Maria Willing et al.   PLoS One

Long-Term Field Data and Climate-Habitat Models Show That Orangutan Persistence Depends on Effective Forest Management and Greenhouse Gas Mitigation

(2012) Stephen D. Gregory et al.   PLoS One

The great human expansion

(2012) B. M. Henn et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change

(2012) W. Miller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Genome Sequence Resource for the Aye-Aye (Daubentonia madagascariensis), a Nocturnal Lemur from Madagascar

(2011) George H. Perry et al.   Genome Biology and Evolution

Comparative RNA sequencing reveals substantial genetic variation in endangered primates

(2011) G. H. Perry et al.   GENOME RESEARCH

A conserved haplotype controls parallel adaptation in geographically distant salmonid populations

(2011) MICHAEL R. MILLER et al.   MOLECULAR ECOLOGY

Short reads and nonmodel species: exploring the complexities of next-generation sequence assembly and SNP discovery in the absence of a reference genome

(2011) M. V. EVERETT et al.   Molecular Ecology Resources

SNP discovery in black cottonwood (Populus trichocarpa) by population transcriptome resequencing

(2011) ARMANDO GERALDES et al.   Molecular Ecology Resources

IUCN management categories fail to represent new, multiple-use protected areas in Madagascar

(2011) Charlie J. Gardner   ORYX

Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil)

(2011) W. Miller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

“Life history space”: A multivariate analysis of life history variation in extant and extinct Malagasy lemurs

(2010) Kierstin K. Catlett et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Challenges and opportunities of genetic approaches to biological conservation

(2010) Richard Frankham   BIOLOGICAL CONSERVATION

Calling SNPs without a reference sequence

(2010) Aakrosh Ratan et al.   BMC BIOINFORMATICS

Moving beyond static species distribution models in support of conservation biogeography

(2010) Janet Franklin   DIVERSITY AND DISTRIBUTIONS

Applications of next generation sequencing in molecular ecology of non-model organisms

(2010) R Ekblom et al.   HEREDITY

Home range size in the blue-eyed black lemur (Eulemur flavifrons): A comparison between dry and wet seasons

(2010) M. Sylviane N. Volampeno et al.   MAMMALIAN BIOLOGY

Genomic-scale capture and sequencing of endogenous DNA from feces

(2010) GEORGE H. PERRY et al.   MOLECULAR ECOLOGY

Complete Khoisan and Bantu genomes from southern Africa

(2010) Stephan C. Schuster et al.   NATURE

Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing

(2010) Akihiro Fujimoto et al.   NATURE GENETICS

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

Conservation genetics in transition to conservation genomics

(2010) N. Joop Ouborg et al.   TRENDS IN GENETICS

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

The first Korean genome sequence and analysis: Full genome sequencing for a socio-ethnic group

(2009) S.-M. Ahn et al.   GENOME RESEARCH

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Reconstructing Indian population history

(2009) David Reich et al.   NATURE

The Landscape Species Approach: spatially-explicit conservation planning applied in the Adirondacks, USA, and San Guillermo-Laguna Brava, Argentina, landscapes

(2009) Karl A. Didier et al.   ORYX

Vast underestimation of Madagascar's biodiversity evidenced by an integrative amphibian inventory

(2009) D. R. Vieites et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Specialized use of two fingers in free‐ranging aye‐ayes (Daubentonia madagascariensis)

(2008) Stanislav Lhota et al.   AMERICAN JOURNAL OF PRIMATOLOGY

Intergroup relations and home range use in Verreaux's sifaka (Propithecus verreauxi)

(2008) Gita Benadi et al.   AMERICAN JOURNAL OF PRIMATOLOGY

Lemur Diversity in Madagascar

(2008) Russell A. Mittermeier et al.   INTERNATIONAL JOURNAL OF PRIMATOLOGY

The diploid genome sequence of an Asian individual

(2008) Jun Wang et al.   NATURE

Accurate whole human genome sequencing using reversible terminator chemistry

(2008) David R. Bentley et al.   NATURE

Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation

(2008) J. Z. Li et al.   SCIENCE

A method for quantifying biodiversity loss and its application to a 50-year record of deforestation across Madagascar

(2008) Thomas F. Allnutt et al.   Conservation Letters