Wanderer, an interactive viewer to explore DNA methylation and gene expression data in human cancer

TCGA-Assembler: open-source software for retrieving and processing TCGA data

(2014) Yitan Zhu et al.   NATURE METHODS

MethHC: a database of DNA methylation and gene expression in human cancer

(2014) Wei-Yun Huang et al.   NUCLEIC ACIDS RESEARCH

The Cancer Genome Atlas Pan-Cancer analysis project

(2013) John N Weinstein et al.   NATURE GENETICS

Computational approaches to identify functional genetic variants in cancer genomes

(2013)   NATURE METHODS

Mutations in regulators of the epigenome and their connections to global chromatin patterns in cancer

(2013) Christoph Plass et al.   NATURE REVIEWS GENETICS

Exploring TCGA Pan-Cancer Data at the UCSC Cancer Genomics Browser

(2013) Melissa S. Cline et al.   Scientific Reports

Visualizing multidimensional cancer genomics data

(2013) Michael P Schroeder et al.   Genome Medicine

MENT: Methylation and expression database of normal and tumor tissues

(2012) Su-Jin Baek et al.   GENE

Alternative Splicing of SLC39A14 in Colorectal Cancer is Regulated by the Wnt Pathway

(2010) Kasper Thorsen et al.   MOLECULAR & CELLULAR PROTEOMICS