Dynamics and control of state-dependent networks for probing genomic organization

On emerging nuclear order

(2011) Indika Rajapakse et al.   JOURNAL OF CELL BIOLOGY

Controllability of complex networks

(2011) Yang-Yu Liu et al.   NATURE

Genome-wide MyoD Binding in Skeletal Muscle Cells: A Potential for Broad Cellular Reprogramming

(2010) Yi Cao et al.   DEVELOPMENTAL CELL

Direct conversion of fibroblasts to functional neurons by defined factors

(2010) Thomas Vierbuchen et al.   NATURE

Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression

(2009) Y. Cheng et al.   GENOME RESEARCH

Self-organization in the genome

(2009) T. Misteli   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The emergence of lineage-specific chromosomal topologies from coordinate gene regulation

(2009) I. Rajapakse et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

(2009) E. Lieberman-Aiden et al.   SCIENCE

Pluripotency and nuclear reprogramming

(2008) S. Yamanaka   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES