Article
Infectious Diseases
Laura J. White, Ellen F. Young, Mark J. Stoops, Sandra R. Henein, Elizabeth C. Adams, Ralph S. Baric, Aravinda M. de Silva
Summary: The four serotypes of dengue virus infect millions of people each year, making the development of vaccines challenging. TAK-003, a tetravalent live attenuated dengue vaccine candidate, induces high levels of neutralizing antibodies. The vaccine primarily generates neutralizing antibodies targeting unique epitopes on DENV2, while the levels of neutralizing antibodies against DENV1, DENV3, and DENV4 are lower.
PLOS NEGLECTED TROPICAL DISEASES
(2021)
Article
Biochemistry & Molecular Biology
Hisae Kuoch, Karina Krotova, Melanie L. Graham, Mark L. Brantly, George Aslanidi
Summary: Accurate assessment of AAV-specific pre-existing humoral immunity is crucial for effective use of clinical gene therapy. This study presents a method that applies equivalent infection conditions to each AAV serotype and validates it through evaluating neutralizing antibody titers in human donors, dogs, and non-human primates. The method allows for rapid and accurate evaluation of neutralizing titers for individual subjects, aiding clinical enrollment and the selection of the most suitable AAV serotype for each patient.
Article
Virology
Jennifer L. Remmel, Julia C. Frei, Savannah E. Butler, Jonathan R. Lai, Margaret E. Ackerman
Summary: The study found that bivalent IgG forms of EDE antibodies neutralize the Dengue virus more effectively than their monovalent Fabs counterparts. Additionally, different EDE antibodies may employ diverse neutralization mechanisms, despite sharing the same epitope.
Article
Multidisciplinary Sciences
Stephan T. Kudlacek, Stefan Metz, Devina Thiono, Alexander M. Payne, Thanh T. N. Phan, Shaomin Tian, Lawrence J. Forsberg, Jack Maguire, Ian Seim, Shu Zhang, Ashutosh Tripathy, Joseph Harrison, Nathan Nicely, Sandrine Soman, Michael K. McCracken, Gregory D. Gromowski, Richard G. Jarman, Lakshmanane Premkumar, Aravinda M. de Silva, Brian Kuhlman
Summary: By utilizing molecular modeling, researchers identified mutations in the DENV2 E protein that induce dimerization at low concentrations and enhance production yield. Antibodies targeting the stabilized dimers were found to elicit higher levels of DENV2-neutralizing antibodies compared to antibodies targeting WT E antigen. These findings demonstrate the potential of structure-based design for producing subunit vaccines for dengue and other flaviviruses.
Review
Virology
Emma Parker Miller, Maxwell T. Finkelstein, Molly C. Erdman, Paul C. Seth, Daniela Fera
Summary: Approximately 10-20% of HIV-1 infected individuals develop antibodies that can neutralize diverse HIV-1 strains, which are crucial for vaccine design and therapy. Structural analyses reveal a limited number of vulnerable sites on the HIV-1 spike, providing insights for vaccine design and combination therapy strategies to reduce viral resistance mutations. Recent updates on spike structures in complex with broadly neutralizing antibodies are discussed in the context of all epitopes identified to date.
Article
Virology
Keigo Yato, Taishi Onodera, Mami Matsuda, Saya Moriyama, Akira Fujimoto, Koichi Watashi, Hideki Aizaki, Tomohisa Tanaka, Kohji Moriishi, Hironori Nishitsuji, Kunitada Shimotohno, Koji Tamura, Yoshimasa Takahashi, Takaji Wakita, Masamichi Muramatsu, Takanobu Kato, Ryosuke Suzuki
Summary: This study generated 13 MAbs targeting the preS1 receptor binding domain from preS1-specific memory B cells derived from DNA-immunized mice, classifying them into three groups according to epitope regions. MAbs recognizing epitopes I and III were found to neutralize HBV infection, with epitope I identified as a semipangenotypic neutralizing epitope and epitope III as a genotype-specific epitope. Furthermore, it was shown that neutralizing MAbs against preS1 could neutralize HBV bearing a vaccine-induced escape mutation, providing insight into novel immunoprophylaxis for HBV infection prevention and treatment.
JOURNAL OF VIROLOGY
(2021)
Article
Virology
Laura A. VanBlargan, Pavle S. Milutinovic, Leslie Goo, Christina R. DeMaso, Anna P. Durbin, Stephen S. Whitehead, Theodore C. Pierson, Kimberly A. Dowd
Summary: This study reveals that minor sequence variations among virus strains impact the neutralization of Dengue virus serotype 1 by polyclonal antibodies, suggesting that neutralization sensitivity is influenced by various factors beyond variation within antibody epitopes. Understanding the antibody targets and factors governing their access to antibodies has significant implications for the design and evaluation of Dengue virus immunogens.
JOURNAL OF VIROLOGY
(2021)
Article
Biochemistry & Molecular Biology
Aiping Wang, Jinran Du, Hua Feng, Jingming Zhou, Yumei Chen, Yankai Liu, Min Jiang, Rui Jia, Yuanyuan Tian, Gaiping Zhang
Summary: This study successfully cloned the BTV1 VP2 gene and expressed the protein in insect cells, leading to the production of effective vaccines. Three anti-BTV1 VP2 monoclonal antibodies were generated, and a novel B-cell epitope on the VP2 protein was identified, laying a foundation for the development of diagnostic and prophylactic methods for bluetongue disease.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
(2021)
Article
Biochemistry & Molecular Biology
Qianru Xu, Junqing Guo, Fanshu Ma, Linke Liu, Yanan Wang, Shenli Zhang, Xiangxiang Niu, Xueyang Li, Min Jiang, Yanwei Wang, Li Wang, Yunchao Liu, Qingmei Li, Shujun Chai, Ruining Wang, Qiang Ma, Erqin Zhang, Gaiping Zhang
Summary: In this study, four monoclonal antibodies against CSFV were generated through immunization of Balb/c mice with plant-derived E2 protein. Two of these antibodies effectively blocked CSFV infection of PK-15 cells by recognizing a novel linear epitope. The study provides an ideal candidate peptide for new vaccine design and differential diagnosis of CSFV, contributing to the control and eradication of classical swine fever.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
(2021)
Article
Immunology
Chenjuan Shi, Li Tian, Wenwen Zheng, Yelei Zhu, Peilu Sun, Lele Liu, Wenkai Liu, Yanyan Song, Xianzhu Xia, Xianghong Xue, Xuexing Zheng
Summary: The study found that AAV9-RABVG is a single-dose vaccine candidate that can induce robust, long-term humoral responses and Th1 and Th2 cell-mediated immune responses in mice and non-human primates.
EMERGING MICROBES & INFECTIONS
(2022)
Article
Microbiology
Angkana T. Huang, Henrik Salje, Ana Coello Escoto, Nayeem Chowdhury, Christian Chavez, Bernardo Garcia-Carreras, Wiriya Rutvisuttinunt, Irina Maljkovic Berry, Gregory D. Gromowski, Lin Wang, Chonticha Klungthong, Butsaya Thaisomboonsuk, Ananda Nisalak, Luke M. Trimmer-Smith, Isabel Rodriguez-Barraquer, Damon W. Ellison, Anthony R. Jones, Stefan Fernandez, Stephen J. Thomas, Derek J. Smith, Richard Jarman, Stephen S. Whitehead, Derek A. T. Cummings, Leah C. Katzelnick
Summary: Neutralizing antibodies play a crucial role in protecting against dengue. However, the factors that contribute to variation in neutralization across different strains of dengue virus are not well understood. This study investigated the effects of changes in the protein sequence of all 10 dengue viral proteins on antigenic distances. The results showed that residue changes in the envelope protein and nonstructural protein 2A had significant effects on antigenic distances, suggesting that nonstructural proteins may modulate neutralizability. This study highlights the importance of considering antigenic determinants beyond the surface proteins in understanding antibody recognition of dengue viruses.
Article
Microbiology
Rachel Yamin, Kevin S. Kao, Margaret R. MacDonald, Tineke Cantaert, Charles M. Rice, Jeffrey V. Ravetch, Stylianos Bournazos
Summary: This study identified the mechanisms by which antibodies against dengue virus mediate pathogenic activities, guiding the development of novel approaches to control dengue disease.
NATURE MICROBIOLOGY
(2023)
Article
Gastroenterology & Hepatology
Leidy D. Caraballo Galva, Xiaotao Jiang, Mohamed S. Hussein, Huajun Zhang, Rui Mao, Pierce Brody, Yibing Peng, Aiwu Ruth He, Mercy Kehinde-Ige, Ramses Sadek, Xiangguo Qiu, Huidong Shi, Yukai He
Summary: This study developed new low-affinity monoclonal antibodies and low-avidity CARTs for HCC, demonstrating that low-avidity CARTs can resist exhaustion and maintain functions in solid tumors, generating durable antitumor effects.
Article
Chemistry, Analytical
Kanaporn Poltep, Emi E. Nakayama, Tadahiro Sasaki, Takeshi Kurosu, Yoshiki Takashima, Juthamas Phadungsombat, Nathamon Kosoltanapiwat, Borimas Hanboonkunupakarn, Sarin Suwanpakdee, Hisham A. Imad, Narinee Srimark, Chiaki Kitamura, Atsushi Yamanaka, Akio Okubo, Tatsuo Shioda, Pornsawan Leaungwutiwong
Summary: The research team successfully developed serotype-specific immunochromatography systems for all four DENV serotypes, showing high specificity and sensitivity. These systems can rapidly detect DENV with good performance in laboratory and clinical validation. In DENV-endemic areas, these assay systems could accelerate both infection diagnosis and epidemiologic studies.
Review
Immunology
Animesh Sarker, Nidhi Dhama, Rinkoo Devi Gupta
Summary: Dengue is a common viral infection transmitted by mosquitoes in tropical countries. While the initial infection is usually mild, secondary infections can be severe and potentially fatal. The antibodies produced in response to vaccination or primary infection are often weakly neutralizing and can increase the risk of antibody-dependent enhancement (ADE) during subsequent infections.
FRONTIERS IN IMMUNOLOGY
(2023)
Article
Microbiology
Michael P. Doyle, Joseph R. Genualdi, Adam L. Bailey, Nurgun Kose, Christopher Gainza, Jessica Rodriguez, Kristen M. Reeder, Christopher A. Nelson, Prashant N. Jethva, Rachel E. Sutton, Robin G. Bombardi, Michael L. Gross, Justin G. Julander, Daved H. Fremont, Michael S. Diamond, James E. Crowe
Summary: Yellow fever virus (YFV) is a mosquito-borne virus that occasionally causes outbreaks of severe infection in South America and sub-Saharan Africa. Effective vaccines have been developed, but recent production and distribution issues have left many people vulnerable. This study aimed to isolate an antibody from individuals who had received the YFV vaccine for future use as a biologic drug. The most powerful antiviral antibody was found to be effective in animal models of human infection. These studies provide insights into the human immune response to YFV and offer a potential therapeutic antibody candidate for inhibiting highly virulent strains of the virus.
Article
Multidisciplinary Sciences
Liya Hu, Wilhelm Salmen, Rong Chen, Yi Zhou, Frederick Neill, James E. Crowe, Robert L. Atmar, Mary K. Estes, B. V. Venkataram Prasad
Summary: This study reveals the structure and features of human norovirus GII.4 virus-like particles using X-ray crystallography and cryo-EM. It uncovers the adaptability and stability of the capsid protein VP1, as well as its potential antigen presentation mechanism, providing valuable insights for vaccine development.
NATURE COMMUNICATIONS
(2022)
Article
Cell Biology
Jennifer M. Pfaff-Kilgore, Edgar Davidson, Kathryn Kadash-Edmondson, Mayda Hernandez, Erin Rosenberg, Ross Chambers, Matteo Castelli, Nicola Clementi, Nicasio Mancini, Justin R. Bailey, James E. Crowe, Mansun Law, Benjamin J. Doranz
Summary: The E1 and E2 envelope proteins of hepatitis C virus (HCV) form a surprisingly fragile complex where even a single alanine mutation at 92% of positions disrupts its function. The identified amino-acid-level targets are highly conserved and functionally critical, providing potential opportunities for improved therapies and vaccines against hepatitis C.
Article
Microbiology
Clara T. Schoeder, Pavlo Gilchuk, Amandeep K. Sangha, Kaitlyn V. Ledwitch, Delphine C. Malherbe, Xuan Zhang, Elad Binshtein, Lauren E. Williamson, Cristina E. Martina, Jinhui Dong, Erica Armstrong, Rachel Sutton, Rachel Nargi, Jessica Rodriguez, Natalia Kuzmina, Brooke Fiala, Neil P. King, Alexander Bukreyev, James E. Crowe, Jens Meiler
Summary: This study presents the design and functional validation of an epitope-focused immunogen based on the HR2-MPER epitope of the ebolavirus. The results demonstrate the capabilities and challenges of computational epitope-focused vaccine design, and provide insights for the rational design of immunogens against ebolavirus.
Article
Immunology
Jane C. Figueiredo, Fred R. Hirsch, Lawrence H. Kushi, Wendy N. Nembhard, James M. Crawford, Nicholas Mantis, Laurel Finster, Noah M. Merin, Akil Merchant, Karen L. Reckamp, Gil Y. Melmed, Jonathan Braun, Dermot McGovern, Samir Parekh, Douglas A. Corley, Namvar Zohoori, Benjamin C. Amick, Ruofei Du, Peter K. Gregersen, Betty Diamond, Emanuela Taioli, Carlos Sariol, Ana Espino, Daniela Weiskopf, Alba Gifoni, James Brien, William Hanege, Marc Lipsitch, David A. Zidar, Ann Scheck McAlearney, Ania Wajnberg, Joshua LaBaer, E. Yvonne Lewis, Raquel A. Binder, Ann M. Moormann, Catherine Forconi, Sarah Forrester, Jennifer Batista, John Schieffelin, Dongjoo Kim, Giulia Biancon, Jennifer VanOudenhove, Stephanie Halene, Rong Fan, Dan H. Barouch, Galit Alter, Swetha Pinninti, Suresh B. Boppana, Sunil K. Pati, Misty Latting, Andrew H. Karaba, John Roback, Rafick Sekaly, Andrew Neish, Ahnalee M. Brincks, Douglas A. Granger, Amy B. Karger, Bharat Thyagarajan, Stefani N. Thomas, Sabra L. Klein, Andrea L. Cox, Todd Lucas, Debra Furr-Holden, Kent Key, Nicole Jones, Jens Wrammerr, Mehul Suthar, Serre Yu Wong, Natalie M. Bowman, Viviana Simon, Lynne D. Richardson, Russell McBride, Florian Krammer, Meenakshi Rana, Joshua Kennedy, Karl Boehme, Craig Forrest, Steve W. Granger, Christopher D. Heaney, Maria Knight Lapinski, Shannon Wallet, Ralph S. Baric, Luca Schifanella, Marcos Lopez, Soledad Fernandez, Eben Kenah, Ashish R. Panchal, William J. Britt, Inaki Sanz, Madhav Dhodapkar, Rafi Ahmed, Luther A. Bartelt, Alena J. Markmann, Jessica T. Lin, Robert S. Hagan, Matthew C. Wolfgang, Jacek Skarbinski
Summary: SeroNet is a large US multi-institutional coordinated initiative that researches immune response to SARS-CoV-2 infection and vaccination. The research program and infrastructure development can assist in preparedness and response for other emerging diseases worldwide.
OPEN FORUM INFECTIOUS DISEASES
(2022)
Article
Microbiology
Amy B. Karger, James D. Brien, Jayne M. Christen, Santosh Dhakal, Troy J. Kemp, Sabra L. Klein, Ligia A. Pinto, Lakshmanane Premkumar, John D. Roback, Raquel A. Binder, Karl W. Boehme, Suresh Boppana, Carlos Cordon-Cardo, James M. Crawford, John L. Daiss, Alan P. Dupuis Ii, Ana M. Espino, Adolfo Firpo-Betancourt, Catherine Forconi, J. Craig Forrest, Roxie C. Girardin, Douglas A. Granger, Steve W. Granger, Natalie S. Haddad, Christopher D. Heaney, Danielle T. Hunt, Joshua L. Kennedy, Christopher L. King, Florian Krammer, Kate Kruczynski, Joshua LaBaer, F. Eun-Hyung Lee, William T. Lee, Shan-Lu Liu, Gerard Lozanski, Todd Lucas, Damodara Rao Mendu, Ann M. Moormann, Vel Murugan, Nkemakonam C. Okoye, Petraleigh Pantoja, Anne F. Payne, Jin Park, Swetha Pinninti, Amelia K. Pinto, Nora Pisanic, Ji Qiu, Carlos A. Sariol, Viviana Simon, Lusheng Song, Tara L. Steffen, E. Taylor Stone, Linda M. Styer, Mehul S. Suthar, Stefani N. Thomas, Bharat Thyagarajan, Ania Wajnberg, Jennifer L. Yates, Kimia Sobhani
Summary: The National Cancer Institute (NCI) established the SeroNet in October 2020 to study the immune response to COVID-19 and improve serological testing. SeroNet institutions have developed a variety of COVID-19 serological assays and are working towards harmonization of results through calibration to reference standards.
Article
Multidisciplinary Sciences
Lauren E. Williamson, Abhishek Bandyopadhyay, Kevin Bailey, Devika Sirohi, Thomas Klose, Justin G. Julander, Richard J. Kuhn, James E. Crowe
Summary: This report presents cryo-electron microscopy reconstructions of three neutralizing human monoclonal antibodies against Eastern equine encephalitis virus (EEEV), and analyzes the factors contributing to the differences in their neutralization potencies. Structural and biophysical insights are provided, which can inform the design of candidate vaccines and therapeutic antibodies for all icosahedral viruses.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2023)
Article
Cell Biology
Saravanan Raju, Lucas J. Adams, James T. Earnest, Kelly Warfield, Lo Vang, James E. Crowe Jr, Daved H. Fremont, Michael S. Diamond
Summary: By analyzing samples from a phase 2 clinical trial, researchers found that the PXVX0317 vaccine induced high levels of neutralizing antibodies and circulating antigen-specific B cells against chikungunya virus. Monoclonal antibodies generated from peripheral blood B cells of vaccinated individuals demonstrated potent neutralization of CHIKV and related arthritogenic alphaviruses. These findings highlight the inhibitory breadth and activity of the B cell response induced by the PXVX0317 vaccine against CHIKV and potentially other related alphaviruses.
SCIENCE TRANSLATIONAL MEDICINE
(2023)
Article
Microbiology
Robert Stass, Taylor B. Engdahl, Nathaniel S. Chapman, Rachael M. Wolters, Laura S. Handal, Summer M. Diaz, James E. Crowe, Thomas A. Bowden
Summary: This study identifies a highly neutralizing human monoclonal antibody, SNV-42, that interferes with receptor recognition and fusion during hantavirus host-cell entry. Structural analysis reveals the mechanism by which SNV-42 binds to the Gn-Gc heterodimer lattice and inhibits viral infection, providing a blueprint for understanding the human neutralizing antibody response to hantavirus infection.
NATURE MICROBIOLOGY
(2023)
Article
Multidisciplinary Sciences
Cynthia M. McMillen, Nathaniel S. Chapman, Ryan M. Hoehl, Lauren B. Skvarca, Madeline M. Schwarz, Laura S. Handal, James E. Crowe Jr, Amy L. Hartman
Summary: The authors demonstrate in rodent models that a neutralizing monoclonal antibody can prevent vertical transmission of RVFV both before and after infection. RVFV is an emerging mosquito-transmitted virus that circulates in livestock and humans in Africa and the Middle East. The antibody reduces viral replication and provides protection against RVFV infection and vertical transmission in both dams and offspring.
NATURE COMMUNICATIONS
(2023)
Article
Medicine, Research & Experimental
Nicole Frumento, Alexis Figueroa, Tingchang Wang, Muhammad N. Zahid, Shuyi Wang, Guido Massaccesi, Georgia Stavrakis, James E. Crowe, Andrew Flyak, Hongkai Ji, Stuart C. Ray, George M. Shaw, Andrea L. Cox, Justin R. Bailey
Summary: This study investigated the development of broadly neutralizing antibodies (bNAbs) in HCV-infected individuals, including those with persistent infection or spontaneous clearance of multiple reinfections. The findings showed that the breadth and potency of the antibody response increased with exposure to genetically distinct infections and longer duration of viremia. Importantly, repeated exposure to antigenically related, antibody-sensitive envelope proteins was associated with potent bNAb induction. These results suggest that a prime-boost vaccine strategy with genetically distinct, antibody-sensitive viruses could be a promising approach to inducing potent bNAbs in humans.
JOURNAL OF CLINICAL INVESTIGATION
(2022)
Article
Medicine, Research & Experimental
Ronald R. Cobb, Joseph Nkolola, Pavlo Gilchuk, Abishek Chandrashekar, Jingyou Yu, Robert House, Christopher G. Earnhart, Nicole M. Dorsey, Svetlana A. Hopkins, Doris M. Snow, Rita E. Chen, Laura A. VanBlargan, Manuel Hechenblaickner, Brian Hoppe, Laura Collins, Milan T. Tomic, Genevieve H. Nonet, Kyal Hackett, James C. Slaughter, Mark G. Lewis, Hanne Andersen, Anthony Cook, Michael S. Diamond, Robert H. Carnahan, Dan H. Barouch, James E. Crowe
Summary: This study demonstrates that neutralizing antibodies with extended half-life and lacking Fc-mediated effector functions are highly effective for pre-exposure prophylaxis of SARS-CoV-2 infection in NHPs, supporting the clinical development of ADM03820 for COVID-19 prevention.
Article
Medicine, Research & Experimental
Naveenchandra Suryadevara, Andrea R. Shiakolas, Laura A. VanBlargan, Elad Binshtein, Rita E. Chen, James Brett Case, Kevin J. Kramer, Erica C. Armstrong, Luke Myers, Andrew Trivette, Christopher Gainza, Rachel S. Nargi, Christopher N. Selverian, Edgar Davidson, Benjamin J. Doranz, Summer M. Diaz, Laura S. Handal, Robert H. Carnahan, Michael S. Diamond, Ivelin S. Georgiev, James E. Crowe
Summary: This study identifies a rare human antibody, COV23434, that disrupts the integrity of the SARS-CoV-2 S protein and possesses a distinct class of functional activity. The findings suggest that the trimer interface region of the S protein may be a vulnerable site for the virus.
JOURNAL OF CLINICAL INVESTIGATION
(2022)
Meeting Abstract
Gastroenterology & Hepatology
P. Lopez Marte, L. Ramos-Tollinchi, E. Rodriguez-Martino, R. Medina-Prieto, S. Ojeda, J. Santana-Bagur, P. Pantoja, C. A. Sariol, E. A. Torres
JOURNAL OF CROHNS & COLITIS
(2022)
Meeting Abstract
Gastroenterology & Hepatology
P. Lopez Marte, L. Ramos-Tollinchi, E. Rodriguez-Martino, R. Medina-Prieto, S. Ojeda, J. Santana-Bagur, P. Pantoja, C. A. Sariol, E. A. Torres
JOURNAL OF CROHNS & COLITIS
(2022)